RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 AFPP02771 609 aaKnown RBP6.34□□□□□ -1.39
GYPB-204ENST00000504951 VSIG8P0DPA2 414 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 ACADMP11310 421 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 SFTPCP11686 197 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 GP1BBP13224 206 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 PTPN1P18031 435 aaKnown RBP6.34□□□□□ -1.39
GYPB-204ENST00000504951 CHKAP35790 457 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 GNL1P36915 607 aaPredicted RBP6.34□□□□□ -1.39
GYPB-204ENST00000504951 BCAT1P54687 386 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 MFAP3P55082 362 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 INHBCP55103 352 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 NNTQ13423 1086 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 MCM6Q14566 821 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 SHBQ15464 509 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 SURF1Q15526 300 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 CCDC142Q17RM4 750 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 C8orf34Q49A92 452 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 RILPL1Q5EBL4 403 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 SFMBT2Q5VUG0 894 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 CDCP2Q5VXM1 449 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 DESI1Q6ICB0 168 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 CLEC18BQ6UXF7 455 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 ZNF574Q6ZN55 896 aaPredicted RBP6.34□□□□□ -1.39
GYPB-204ENST00000504951 USP49Q70CQ1 688 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 USP30Q70CQ3 517 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 KANSL1Q7Z3B3 1105 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 GPBP1Q86WP2 473 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 MYCT1Q8N699 235 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 ZNF511Q8NB15 262 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 CLEC18CQ8NCF0 446 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 TTC16Q8NEE8 873 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 ZSWIM2Q8NEG5 633 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 OR2T3Q8NH03 318 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 GOLGA1Q92805 767 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 BIRC7Q96CA5 298 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 CCDC97Q96F63 343 aaPredicted RBP6.34□□□□□ -1.39
GYPB-204ENST00000504951 PIWIL1Q96J94 861 aaKnown RBP6.34□□□□□ -1.39
GYPB-204ENST00000504951 LGMNQ99538 433 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 SLC6A17Q9H1V8 727 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 C6orf106Q9H6K1 298 aaPredicted RBP6.34□□□□□ -1.39
GYPB-204ENST00000504951 STARD5Q9NSY2 213 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 ELOVL2Q9NXB9 296 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 SEL1LQ9UBV2 794 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 SCML1Q9UN30 329 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 RAD54BQ9Y620 910 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 MYLKQ15746 1914 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 TEX15Q9BXT5 2789 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 A0A1W2PPC4 97 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 NEDD8-MDP1E9PL57 170 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 K7ENM7 598 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 SUV39H1O43463 412 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 HCRTO43612 131 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 FAM13AO94988 1023 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 SEMA4FO95754 770 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 ITGAVP06756 1048 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 NEFLP07196 543 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 PLCG1P19174 1290 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 GLDCP23378 1020 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 ACSL1P33121 698 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 ATP5C1P36542 298 aaKnown RBP6.33□□□□□ -1.4
GYPB-204ENST00000504951 PLA2G4AP47712 749 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 HARS2P49590 506 aaKnown RBP6.33□□□□□ -1.4
GYPB-204ENST00000504951 CDH8P55286 799 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 TFAMQ00059 246 aaKnown RBP6.33□□□□□ -1.4
GYPB-204ENST00000504951 GOLGA8FQ08AF8 430 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 KCNA1Q09470 495 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 GOLGA8DPQ0D2H9 430 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 CCDC173Q0VFZ6 552 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 SFSWAPQ12872 951 aaKnown RBP6.33□□□□□ -1.4
GYPB-204ENST00000504951 OVGP1Q12889 678 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 ARID5BQ14865 1188 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 ARL13BQ3SXY8 428 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 KCNT1Q5JUK3 1230 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 FYB2Q5VWT5 728 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 DYMQ7RTS9 669 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 KIAA0907Q7Z7F0 614 aaPredicted RBP6.33□□□□□ -1.4
GYPB-204ENST00000504951 IQCHQ86VS3 1027 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 POMGNT1Q8WZA1 660 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 FBXO32Q969P5 355 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 HPDLQ96IR7 371 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 CDK5RAP3Q96JB5 506 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 ACE2Q9BYF1 805 aaPredicted RBP6.33□□□□□ -1.4
GYPB-204ENST00000504951 BTBD1Q9H0C5 482 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 TMEM245Q9H330 911 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 ZHX3Q9H4I2 956 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 FBXO44Q9H4M3 255 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 VRTNQ9H8Y1 702 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 CSNK1G1Q9HCP0 422 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 TMEM30AQ9NV96 361 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 INTS13Q9NVM9 706 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 TJP2Q9UDY2 1190 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 CHORDC1Q9UHD1 332 aaPredicted RBP6.33□□□□□ -1.4
GYPB-204ENST00000504951 LSM7Q9UK45 103 aaKnown RBP6.33□□□□□ -1.4
GYPB-204ENST00000504951 EXOC7Q9UPT5 735 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 SLCO1B1Q9Y6L6 691 aa6.33□□□□□ -1.4
GYPB-204ENST00000504951 DOPEY2Q9Y3R5 2298 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 MYH10P35580 1976 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 A0A1W2PR77 199 aa6.32□□□□□ -1.4
GYPB-204ENST00000504951 TLR5O60602 858 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms