RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 BIRC7Q96CA5 298 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 PIWIL1Q96J94 861 aaKnown RBP7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 CNDP2Q96KP4 475 aaKnown RBP7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 SLC6A18Q96N87 628 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 TWNKQ96RR1 684 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 ARID3AQ99856 593 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 BTBD1Q9H0C5 482 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 PCED1AQ9H1Q7 454 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 TNMDQ9H2S6 317 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 PRORYQ9H606 182 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 CSNK1G1Q9HCP0 422 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 PPP4R2Q9NY27 417 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 FBXO10Q9UK96 956 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 AGO1Q9UL18 857 aaKnown RBP7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 RAI2Q9Y5P3 530 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 UBE4BO95155 1302 aa7.23□□□□□ -1.25
NPIPB3-203ENST00000504841 CKAP5Q14008 2032 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 DMXL2Q8TDJ6 3036 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 E9PAM4 449 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 PYCARD-AS1I3L0S3 204 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 PCDHGA12O60330 932 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 TSPAN3O60637 253 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 RFPL3O75679 317 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 VNN1O95497 513 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 C4BPAP04003 597 aaKnown RBP7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 DNTTP04053 509 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 ITGAVP06756 1048 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 CD58P19256 250 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 ABCB4P21439 1286 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 CD27P26842 260 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 CASP1P29466 404 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 CHKAP35790 457 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 ASPAP45381 313 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 BCAT1P54687 386 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 RPS14P62263 151 aaKnown RBP7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 CXADRP78310 365 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 DLG4P78352 724 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 COG7P83436 770 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 CCDC173Q0VFZ6 552 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 TARDBPQ13148 414 aaKnown RBP eCLIP7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 CAMK2GQ13555 558 aaPredicted RBP7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 E2F5Q15329 346 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 TTC31Q49AM3 519 aaPredicted RBP7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 TMEM215Q68D42 235 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 KIAA0895LQ68EN5 471 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 KLHDC10Q6PID8 442 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 EPM2AIP1Q7L775 607 aaPredicted RBP7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 TADA2BQ86TJ2 420 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 ZNF843Q8N446 348 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 EID2Q8N6I1 236 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 ZNF507Q8TCN5 953 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 BAP1Q92560 729 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 CYFIP2Q96F07 1278 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 USP28Q96RU2 1077 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 ACE2Q9BYF1 805 aaPredicted RBP7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 LRRC27Q9C0I9 530 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 BLZF1Q9H2G9 400 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 VRTNQ9H8Y1 702 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 SLC39A2Q9NP94 309 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 AASDHPPTQ9NRN7 309 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 MARCH2Q9P0N8 246 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 STRIP2Q9ULQ0 834 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 ZNF510Q9Y2H8 683 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 PCDHA5Q9Y5H7 936 aa7.22□□□□□ -1.25
NPIPB3-203ENST00000504841 A0A1B0GTQ1 180 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 CYSRT1A8MQ03 144 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 TK2O00142 265 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 CAPN9O14815 690 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 STX6O43752 255 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 LDOC1O95751 146 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 HOXD9P28356 352 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 CTSKP43235 329 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 KIF11P52732 1056 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 AMPD3Q01432 767 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 CFHR1Q03591 330 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 STK38Q15208 465 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 BMT2Q1RMZ1 405 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 C8orf34Q49A92 452 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 ZNF394Q53GI3 561 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 TAF1BQ53T94 588 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 CEP135Q66GS9 1140 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 ZNF776Q68DI1 518 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 UNC13DQ70J99 1090 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 CHST9Q7L1S5 443 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 CCDC186Q7Z3E2 898 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 GPR155Q7Z3F1 870 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 UNC93AQ86WB7 457 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 CRYBG2Q8N1P7 616 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 RBBP8NLQ8NC74 664 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 NAF1Q96HR8 494 aaKnown RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 HS3ST6Q96QI5 342 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 ELF4Q99607 663 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 HNRNPABQ99729 332 aaKnown RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 NT5C1AQ9BXI3 368 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 DCLK3Q9C098 648 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 TMEM245Q9H330 911 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 MTG2Q9H4K7 406 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 MMRN2Q9H8L6 949 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 OSGEPQ9NPF4 335 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 PRSS16Q9NQE7 514 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms