RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 UCP3P55916 312 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 GCNT1Q02742 428 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 CETN1Q12798 172 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 BYSLQ13895 437 aaKnown RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 GLRA4Q5JXX5 417 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 C15orf52Q6ZUT6 534 aaKnown RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 UBE3BQ7Z3V4 1068 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 RHOT2Q8IXI1 618 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 CCDC150Q8NCX0 1101 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 SLC22A17Q8WUG5 538 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 WNT8BQ93098 351 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 ELP4Q96EB1 424 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 YIPF2Q9BWQ6 316 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 MAK16Q9BXY0 300 aaKnown RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 DPH5Q9H2P9 285 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 EHD1Q9H4M9 534 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 SLC39A2Q9NP94 309 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 SEPT10Q9P0V9 454 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 NCDNQ9UBB6 729 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 PADI1Q9ULC6 663 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 PLAGL2Q9UPG8 496 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 RNF123Q5XPI4 1314 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ZSCAN5BA6NJL1 495 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 OPHN1O60890 802 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 RECQL4O94761 1208 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ALX3O95076 343 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 CYC1P08574 325 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 TBXAS1P24557 533 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ADH6P28332 368 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 GBX2P52951 348 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 SPDYCQ5MJ68 293 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 STEAP3Q658P3 488 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 CTR9Q6PD62 1173 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 GADL1Q6ZQY3 521 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 C1orf229Q6ZS94 237 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 CARFQ8N187 725 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 CNNM3Q8NE01 707 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 CTAGE1Q96RT6 745 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 NAA11Q9BSU3 229 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 GORASP2Q9H8Y8 452 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 PLEKHA2Q9HB19 425 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 TM7SF3Q9NS93 570 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 MALT1Q9UDY8 824 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ELOA3CA0A087WX78 387 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 PRSS29PA6NIE9 313 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ELOA3DA6NLF2 546 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 PEX12O00623 359 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 PRAMEF4O60810 478 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ERLIN1O75477 346 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 POLR2MP0CAP2 368 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 NPPBP16860 134 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 RPL10P27635 214 aaKnown RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 HADHBP55084 474 aaKnown RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 CEBPZQ03701 1054 aaKnown RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 GABPB1Q06547 395 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ELOA3BQ3SY89 546 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 RINT1Q6NUQ1 792 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 CHSY3Q70JA7 882 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 MON1AQ86VX9 555 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 SGMS1Q86VZ5 419 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 DNAJC5GQ8N7S2 189 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF321PQ8N8H1 164 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 IL17RCQ8NAC3 791 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ELOA3Q8NG57 546 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 RAPGEF5Q92565 580 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 EID2BQ96D98 161 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 GPR20Q99678 358 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 SH3GL2Q99962 352 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 SLC5A7Q9GZV3 580 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 COQ10BQ9H8M1 238 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 HEYLQ9NQ87 328 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 ERVK13-1Q9NX77 482 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 SLC45A2Q9UMX9 530 aa5.48□□□□□ -1.53
NIPBL-204ENST00000504430 R3HDM2Q9Y2K5 976 aaKnown RBP5.48□□□□□ -1.53
NIPBL-204ENST00000504430 CCDC169A6NNP5 214 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 NME6O75414 186 aaPredicted RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PENKP01210 267 aaPredicted RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ANXA6P08133 673 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 MYBL1P10243 752 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 AGAP20933 346 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PTAFRP25105 342 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 VPS41P49754 854 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 RNASELQ05823 741 aaKnown RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 CD69Q07108 199 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PTK6Q13882 451 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 SEC23BQ15437 767 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PROSER3Q2NL68 480 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 TYSND1Q2T9J0 566 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 TCP11X2Q5H9J9 407 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 THEMIS2Q5TEJ8 643 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 GKAP1Q5VSY0 366 aaPredicted RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 CES4AQ5XG92 561 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 SLCO4C1Q6ZQN7 724 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 PIK3AP1Q6ZUJ8 805 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 SLC7A5P1Q8MH63 180 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF655Q8N720 491 aaPredicted RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 HOXB13Q92826 284 aaPredicted RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 UTP14AQ9BVJ6 771 aaKnown RBP5.47□□□□□ -1.53
NIPBL-204ENST00000504430 NT5C3AQ9H0P0 336 aa5.47□□□□□ -1.53
NIPBL-204ENST00000504430 EPB41L1Q9H4G0 881 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms