RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 BEND5Q7L4P6 421 aa14.59□□□□□ -0.07
PDLIM7-211ENST00000504318 ENOSF1Q7L5Y1 443 aa14.59□□□□□ -0.07
PDLIM7-211ENST00000504318 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.59□□□□□ -0.07
PDLIM7-211ENST00000504318 PRICKLE1Q96MT3 831 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-211ENST00000504318 SLC6A17Q9H1V8 727 aa14.59□□□□□ -0.07
PDLIM7-211ENST00000504318 THAP9Q9H5L6 903 aa14.59□□□□□ -0.07
PDLIM7-211ENST00000504318 VPS45Q9NRW7 570 aa14.59□□□□□ -0.07
PDLIM7-211ENST00000504318 TMEM74BQ9NUR3 256 aa14.59□□□□□ -0.07
PDLIM7-211ENST00000504318 CALCOCO1Q9P1Z2 691 aa14.59□□□□□ -0.07
PDLIM7-211ENST00000504318 ASCC3Q8N3C0 2202 aaKnown RBP14.58□□□□□ -0.07
PDLIM7-211ENST00000504318 CACNA1EQ15878 2313 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 IGHV1OR15-9A0A0B4J2B8 117 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 LNP1A1A4G5 178 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 PATE3B3GLJ2 98 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 CAVIN2O95810 425 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 PITX1P78337 314 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 KCNMA1Q12791 1236 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 NNTQ13423 1086 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 EXOC3L4Q17RC7 722 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 ADGRF1Q5T601 910 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 PIK3R6Q5UE93 754 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 SYPL2Q5VXT5 272 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 GBP6Q6ZN66 633 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 ANKS1BQ7Z6G8 1248 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 ADIPOR2Q86V24 386 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 SCUBE3Q8IX30 993 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 CHPFQ8IZ52 775 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 DQX1Q8TE96 717 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 RNF139Q8WU17 664 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 AZIN2Q96A70 460 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 MRGPRX1Q96LB2 322 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 SLC2A11Q9BYW1 496 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 NAALADL1Q9UQQ1 740 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 STON1Q9Y6Q2 735 aa14.58□□□□□ -0.08
PDLIM7-211ENST00000504318 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 GOLGA6L7A0A1B0GV03 622 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 E5RJQ4 531 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 CDX4O14627 284 aaPredicted RBP14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 LETM1O95202 739 aaPredicted RBP14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 KRT5P13647 590 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 ERCC5P28715 1186 aaPredicted RBP14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 GNA15P30679 374 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 GBP1P32455 592 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 CLCN1P35523 988 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 HARS2P49590 506 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 COPAP53621 1224 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 CREB5Q02930 508 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 PDCLQ13371 301 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 EIF4HQ15056 248 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 MAN2A1Q16706 1144 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 PTPRNQ16849 979 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 FUT11Q495W5 492 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 MPPE1Q53F39 396 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 SPDYCQ5MJ68 293 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 NUDT18Q6ZVK8 323 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 TAC4Q86UU9 113 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 SLC41A1Q8IVJ1 513 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 TMEFF1Q8IYR6 380 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 GPT2Q8TD30 523 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 SORCS1Q8WY21 1168 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 MKRN2Q9H000 416 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 MIS12Q9H081 205 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 ELOVL2Q9NXB9 296 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 XPO7Q9UIA9 1087 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 PCDHGC3Q9UN70 934 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 NUMA1Q14980 2115 aa14.57□□□□□ -0.08
PDLIM7-211ENST00000504318 ADAMTS9Q9P2N4 1935 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 NPC1O15118 1278 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 ACSL4O60488 711 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 TSPAN3O60637 253 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 PNMA6AP0CW24 399 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 NCAM1P13591 858 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 PRKCHP24723 683 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 ACADSBP45954 432 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 ZNF445P59923 1031 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 ZNF234Q14588 700 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 TAF5Q15542 800 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 ARHGAP44Q17R89 818 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 AASDHQ4L235 1098 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 MPP7Q5T2T1 576 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 STPG1Q5TH74 334 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 NUGGCQ68CJ6 796 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 RFWD3Q6PCD5 774 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 METTL3Q86U44 580 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 DDI1Q8WTU0 396 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 ERLEC1Q96DZ1 483 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 MYO19Q96H55 970 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 FAM81BQ96LP2 452 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 CPXM1Q96SM3 734 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 NAA15Q9BXJ9 866 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 ADAM33Q9BZ11 813 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 IRX2Q9BZI1 471 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 NUP62CLQ9H1M0 184 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 TMEM245Q9H330 911 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 SAMSN1Q9NSI8 373 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 USP36Q9P275 1121 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 EVLQ9UI08 416 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 PILRBQ9UKJ0 227 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 TLR6Q9Y2C9 796 aa14.56□□□□□ -0.08
PDLIM7-211ENST00000504318 NYNRINQ9P2P1 1898 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms