RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 HAPLN3Q96S86 360 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 PEBP4Q96S96 227 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 SMG9Q9H0W8 520 aaKnown RBP14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 POMKQ9H5K3 350 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 DDX56Q9NY93 547 aaKnown RBP14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 CFAP97Q9P2B7 532 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 DNAI1Q9UI46 699 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 LSM7Q9UK45 103 aaKnown RBP14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 FZD10Q9ULW2 581 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 SH3BP1Q9Y3L3 701 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 PCDHA3Q9Y5H8 950 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 C2orf16Q68DN1 1984 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 GRXCR2A6NFK2 248 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 LEFTY2O00292 366 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 PAGE1O75459 146 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 MOCS2O96007 188 aaPredicted RBP14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 RARAP10276 462 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 CORO1AP31146 461 aaKnown RBP14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 CTNNA1P35221 906 aaKnown RBP14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 RWDD2BP57060 319 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 SCAPQ12770 1279 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 FAM78AQ5JUQ0 283 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 ACBD5Q5T8D3 534 aaPredicted RBP14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 TXNRD3NBQ6F5E7 133 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 SYT10Q6XYQ8 523 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 OTOP3Q7RTS5 596 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 KCTD6Q8NC69 237 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 HSPH1Q92598 858 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 SMARCD2Q92925 531 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 AZIN2Q96A70 460 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 ZFRQ96KR1 1074 aaKnown RBP14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 NAPGQ99747 312 aaPredicted RBP14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 DDX50Q9BQ39 737 aaKnown RBP14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 SNRNP25Q9BV90 132 aaKnown RBP14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 TLR10Q9BXR5 811 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 KIF9Q9HAQ2 790 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 PACSIN2Q9UNF0 486 aaPredicted RBP14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 AP4E1Q9UPM8 1137 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 ZNF510Q9Y2H8 683 aa14.36□□□□□ -0.11
CYSTM1-202ENST00000504227 E2F8A0AVK6 867 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 ENC1O14682 589 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 MBTPS2O43462 519 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 ZNF500O60304 480 aaPredicted RBP14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 PRAMEF12O95522 483 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 KRT1P04264 644 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 LAMP2P13473 410 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 TCF3P15923 654 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 CETN2P41208 172 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 PEX5P50542 639 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 DNA2P51530 1060 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 KRT81Q14533 505 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 PDK2Q15119 407 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 SMTNL2Q2TAL5 461 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 LEXMQ3ZCV2 418 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 ATP13A4Q4VNC1 1196 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 CYP4V2Q6ZWL3 525 aaPredicted RBP14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 HTR3DQ70Z44 454 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 DENND1CQ8IV53 801 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 MAP7D3Q8IWC1 876 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 KATNAL2Q8IYT4 538 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 RCOR2Q8IZ40 523 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 MAFAQ8NHW3 353 aaPredicted RBP14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 ADAMTS19Q8TE59 1207 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 KRT35Q92764 455 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 E2F7Q96AV8 911 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 ACSF2Q96CM8 615 aaPredicted RBP14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 ASB16Q96NS5 453 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 MYADMQ96S97 322 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 SIK2Q9H0K1 926 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 OSBPL2Q9H1P3 480 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 DHX35Q9H5Z1 703 aaKnown RBP14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 TRPV4Q9HBA0 871 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 GPATCH2LQ9NWQ4 482 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 FAM50BQ9Y247 325 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 CCL26Q9Y258 94 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 OBSL1O75147 1896 aa14.35□□□□□ -0.11
CYSTM1-202ENST00000504227 CDH23Q9H251 3354 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 DDX3YO15523 660 aaKnown RBP14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 ACSL4O60488 711 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 ZRANB2O95218 330 aaKnown RBP eCLIP14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 LATS1O95835 1130 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 KLKB1P03952 638 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 L1CAMP32004 1257 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 VIPR2P41587 438 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 MARCKSL1P49006 195 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 MLLT6P55198 1093 aaPredicted RBP14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 CDH6P55285 790 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 ZXDBP98169 803 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 PUS10Q3MIT2 529 aaKnown RBP14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 POTEHQ6S545 545 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 EXD1Q8NHP7 514 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 ALG3Q92685 438 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 WBP2Q969T9 261 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 RBM41Q96IZ5 413 aaKnown RBP14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 C1orf74Q96LT6 269 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 ZFP14Q9HCL3 533 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 ANLNQ9NQW6 1124 aa14.34□□□□□ -0.11
CYSTM1-202ENST00000504227 TMPRSS4Q9NRS4 437 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms