RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TPTEP56180 551 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 EIF4A1P60842 406 aaKnown RBP2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 E2F1Q01094 437 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 FOXO1Q12778 655 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 MTAPQ13126 283 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 PRKG1Q13976 671 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 GRM4Q14833 912 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 CLCA4Q14CN2 919 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 POSTNQ15063 836 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 ACOX1Q15067 660 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 CYP1B1Q16678 543 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 TIGD6Q17RP2 521 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 P3H1Q32P28 736 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 KRTAP27-1Q3LI81 207 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 TMEM196Q5HYL7 178 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 AARS2Q5JTZ9 985 aaKnown RBP2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 LIN54Q6MZP7 749 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 RINT1Q6NUQ1 792 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 JMJD6Q6NYC1 403 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 ANKRD16Q6P6B7 361 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 KLHL17Q6TDP4 642 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 LDHAL6AQ6ZMR3 332 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 Q6ZWC4 215 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 PARS2Q7L3T8 475 aaKnown RBP2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 TTC30AQ86WT1 665 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 ZNF354CQ86Y25 554 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 CCDC117Q8IWD4 279 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 CPXCR1Q8N123 301 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 SIRT6Q8N6T7 355 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 OR1N1Q8NGS0 311 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 STT3BQ8TCJ2 826 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 TBC1D20Q96BZ9 403 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 EID2BQ96D98 161 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 WDYHV1Q96HA8 205 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 PRR25Q96S07 402 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 WDR24Q96S15 920 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 NUDT22Q9BRQ3 303 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 TMEM120AQ9BXJ8 343 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 PRDM16Q9HAZ2 1276 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 TRIM36Q9NQ86 728 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 FSCN3Q9NQT6 498 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 LUZP4Q9P127 313 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 LPAR3Q9UBY5 353 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 HERC5Q9UII4 1024 aaKnown RBP2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 GABRQQ9UN88 632 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 ST3GAL5Q9UNP4 418 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 AFG3L2Q9Y4W6 797 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 SMIM35A0A1B0GVV1 85 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 QSOX1O00391 747 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 DHHO43323 396 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 SPRY2O43597 315 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 CBFA2T3O75081 653 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 ACTL6BO94805 426 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 DLDP09622 509 aaKnown RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM163BP0C2L3 166 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 DHRS4L1P0CG22 281 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 CYP2D6P10635 497 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 ENGP17813 658 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 PCSK6P29122 969 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 GSTM5P46439 218 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 POLE2P56282 527 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 SUMO2P61956 95 aaKnown RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 AP2B1P63010 937 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 BIRC3Q13489 604 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 BFSP2Q13515 415 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 ERV3-1Q14264 604 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 CSHL1Q14406 222 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 TAF5Q15542 800 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 ST3GAL2Q16842 350 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 TMEM95Q3KNT9 176 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 TMEM119Q4V9L6 283 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 C4orf46Q504U0 113 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 ATPAF1Q5TC12 328 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 PRAMEF17Q5VTA0 474 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 TANGO2Q6ICL3 276 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 GRHL2Q6ISB3 625 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 PIK3AP1Q6ZUJ8 805 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 WDR53Q7Z5U6 358 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 P3H2Q8IVL5 708 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 SMAP1Q8IYB5 467 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 NRSN1Q8IZ57 195 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 GALNT15Q8N3T1 639 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 ABHD11Q8NFV4 315 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 RP9Q8TA86 221 aaKnown RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 OTUD7AQ8TE49 926 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 WDR60Q8WVS4 1066 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 PPM1EQ8WY54 764 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 RUBCNQ92622 972 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 CTHRC1Q96CG8 243 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 COQ8BQ96D53 544 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 VPS50Q96JG6 964 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 EIF3CQ99613 913 aaKnown RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 RTKNQ9BST9 563 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM167BQ9BTA0 163 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 ISCA1Q9BUE6 129 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 UBA5Q9GZZ9 404 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 PABPC3Q9H361 631 aaKnown RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 TP63Q9H3D4 680 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 MLXIPQ9HAP2 919 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 ITM2CQ9NQX7 267 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms