RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 BRCA1P38398 1863 aaKnown RBP25.26■■□□□ 1.63
DDX41-202ENST00000503078 KLHL33A6NCF5 533 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 ZNF487B1APH4 448 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 PLIN3O60664 434 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 ALDH1A2O94788 518 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 ALDOAP04075 364 aaKnown RBP25.25■■□□□ 1.63
DDX41-202ENST00000503078 STAG3L1P0CL83 205 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 KCNA4P22459 653 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 GBE1Q04446 702 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 INCA1Q0VD86 236 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 SEMA5AQ13591 1074 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 STEAP4Q687X5 459 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 PGM2L1Q6PCE3 622 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 OLFML1Q6UWY5 402 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 DENND5BQ6ZUT9 1274 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 VCX3BQ9H321 246 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 FAM96AQ9H5X1 160 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.25■■□□□ 1.63
DDX41-202ENST00000503078 SERPINE1P05121 402 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 MBTD1Q05BQ5 628 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 CCNIQ14094 377 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 PDE1CQ14123 709 aaPredicted RBP25.25■■□□□ 1.63
DDX41-202ENST00000503078 LY6KQ17RY6 165 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 CNPY1Q3B7I2 92 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 LIN52Q52LA3 116 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 RNF111Q6ZNA4 994 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 NCAPG2Q86XI2 1143 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 UNC5BQ8IZJ1 945 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 SLC26A7Q8TE54 656 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 JADE3Q92613 823 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 ATP2A3Q93084 1043 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 CENPKQ9BS16 269 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 SPATA16Q9BXB7 569 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 MINDY3Q9H8M7 445 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 DNAJC28Q9NX36 388 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 BTBD7Q9P203 1132 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 KIAA1257Q9ULG3 409 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 FZD1Q9UP38 647 aa25.25■■□□□ 1.63
DDX41-202ENST00000503078 TPP1O14773 563 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 TGFB3P10600 412 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 EDNRBP24530 442 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 ADORA2AP29274 412 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 EPHB1P54762 984 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 BTKQ06187 659 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 SLC10A2Q12908 348 aaPredicted RBP25.24■■□□□ 1.63
DDX41-202ENST00000503078 PCLAFQ15004 111 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 CFAP157Q5JU67 520 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 MAVSQ7Z434 540 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 ST13P4Q8IZP2 240 aaPredicted RBP25.24■■□□□ 1.63
DDX41-202ENST00000503078 ACTRT2Q8TDY3 377 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 PPP4R1Q8TF05 950 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 DCDC2Q9UHG0 476 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 WDR27A2RRH5 827 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 TOMM70O94826 608 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 MYL4P12829 197 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 RPS12P25398 132 aaKnown RBP25.24■■□□□ 1.63
DDX41-202ENST00000503078 IDH3AP50213 366 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 NIPAL4Q0D2K0 466 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 PACS1Q6VY07 963 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 KLHL4Q9C0H6 718 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 DMAP1Q9NPF5 467 aaPredicted RBP25.24■■□□□ 1.63
DDX41-202ENST00000503078 XPNPEP3Q9NQH7 507 aa25.24■■□□□ 1.63
DDX41-202ENST00000503078 PROCP04070 461 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 DESP17661 470 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 XIAPP98170 497 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 DYNC1I2Q13409 638 aaKnown RBP25.23■■□□□ 1.63
DDX41-202ENST00000503078 PRKG1Q13976 671 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 GOLGA7BQ2TAP0 167 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 SFT2D3Q587I9 215 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 SAMD7Q7Z3H4 446 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 CDKL2Q92772 493 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 QKIQ96PU8 341 aaKnown RBP eCLIP25.23■■□□□ 1.63
DDX41-202ENST00000503078 SORT1Q99523 831 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 PNPOQ9NVS9 261 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 SLC17A6Q9P2U8 582 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 CDH22Q9UJ99 828 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 ADAMTS6Q9UKP5 1117 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 GRK2P25098 689 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 HDAC4P56524 1084 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 SLC6A3Q01959 620 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 MED21Q13503 144 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 LRRC36Q1X8D7 754 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 KCNT2Q6UVM3 1135 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 CCDC33Q8N5R6 958 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 TRAPPC12Q8WVT3 735 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 NCSTNQ92542 709 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 KHSRPQ92945 711 aaKnown RBP eCLIP25.23■■□□□ 1.63
DDX41-202ENST00000503078 NT5C1AQ9BXI3 368 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 TBC1D30Q9Y2I9 924 aa25.23■■□□□ 1.63
DDX41-202ENST00000503078 SOWAHBA6NEL2 793 aa25.22■■□□□ 1.63
DDX41-202ENST00000503078 PDE5AO76074 875 aa25.22■■□□□ 1.63
DDX41-202ENST00000503078 UQCRBP14927 111 aa25.22■■□□□ 1.63
DDX41-202ENST00000503078 ZFXP17010 805 aaPredicted RBP25.22■■□□□ 1.63
DDX41-202ENST00000503078 NR2C2P49116 596 aa25.22■■□□□ 1.63
DDX41-202ENST00000503078 LPCAT4Q643R3 524 aa25.22■■□□□ 1.63
DDX41-202ENST00000503078 PDPK2PQ6A1A2 396 aa25.22■■□□□ 1.63
DDX41-202ENST00000503078 PMF1Q6P1K2 205 aa25.22■■□□□ 1.63
DDX41-202ENST00000503078 CASC4Q6P4E1 433 aa25.22■■□□□ 1.63
DDX41-202ENST00000503078 EEPD1Q7L9B9 569 aa25.22■■□□□ 1.63
DDX41-202ENST00000503078 RSPH3Q86UC2 560 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms