RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 HOXD12P35452 270 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 BCAT1P54687 386 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 MFAP3P55082 362 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 PDE4CQ08493 712 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 ADIGQ0VDE8 80 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 BST2Q10589 180 aaKnown RBP11.22□□□□□ -0.61
SNCA-207ENST00000502987 CUL2Q13617 745 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 GEN1Q17RS7 908 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 PLEKHG6Q3KR16 790 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 CCDC40Q4G0X9 1142 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 CBWD6Q4V339 395 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 CBWD3Q5JTY5 395 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 WDR45BQ5MNZ6 344 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 CBWD5Q5RIA9 395 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 FYB2Q5VWT5 728 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 ARHGAP17Q68EM7 881 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 ISM2Q6H9L7 571 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 ANKS1BQ7Z6G8 1248 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 FMNL3Q8IVF7 1028 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 EDEM1Q92611 657 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 ERCC4Q92889 916 aaPredicted RBP11.22□□□□□ -0.61
SNCA-207ENST00000502987 FOXJ1Q92949 421 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 PLD4Q96BZ4 506 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 MRGPRX1Q96LB2 322 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 GSDMAQ96QA5 445 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 FAM124BQ9H5Z6 455 aaPredicted RBP11.22□□□□□ -0.61
SNCA-207ENST00000502987 OLA1Q9NTK5 396 aaKnown RBP11.22□□□□□ -0.61
SNCA-207ENST00000502987 SFMBT1Q9UHJ3 866 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 FBXO10Q9UK96 956 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 SLC27A6Q9Y2P4 619 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 TRIM49BA6NDI0 452 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 MEI4A8MW99 385 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 XPO1O14980 1071 aaKnown RBP11.21□□□□□ -0.61
SNCA-207ENST00000502987 NPC1O15118 1278 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 SLC16A3O15427 465 aaKnown RBP11.21□□□□□ -0.61
SNCA-207ENST00000502987 PENKP01210 267 aaPredicted RBP11.21□□□□□ -0.61
SNCA-207ENST00000502987 VDRP11473 427 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 TBXAS1P24557 533 aaPredicted RBP11.21□□□□□ -0.61
SNCA-207ENST00000502987 MAOBP27338 520 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 CD6P30203 668 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 IL12RB1P42701 662 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 BECN1Q14457 450 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 FUT11Q495W5 492 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 MPPE1Q53F39 396 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 RAB41Q5JT25 222 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 BSPRYQ5W0U4 402 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 PM20D1Q6GTS8 502 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 SERPINA13PQ6UXR4 307 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 CACUL1Q86Y37 369 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 TMPRSS6Q8IU80 811 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 SLC41A1Q8IVJ1 513 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 FMR1NBQ8N0W7 255 aaPredicted RBP11.21□□□□□ -0.61
SNCA-207ENST00000502987 MINDY1Q8N5J2 469 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 PRCCQ92733 491 aaPredicted RBP11.21□□□□□ -0.61
SNCA-207ENST00000502987 SIPA1Q96FS4 1042 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 TOE1Q96GM8 510 aaKnown RBP11.21□□□□□ -0.61
SNCA-207ENST00000502987 GPR174Q9BXC1 333 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 GTPBP4Q9BZE4 634 aaKnown RBP11.21□□□□□ -0.61
SNCA-207ENST00000502987 MIR1-1HGQ9H1L0 117 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 CD93Q9NPY3 652 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 ELOVL2Q9NXB9 296 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 THAP10Q9P2Z0 257 aaPredicted RBP11.21□□□□□ -0.61
SNCA-207ENST00000502987 SUSD2Q9UGT4 822 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 KIAA1257Q9ULG3 409 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 PLA2G4CQ9UP65 541 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 PCDHB9Q9Y5E1 797 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 PCDHB4Q9Y5E5 795 aa11.21□□□□□ -0.61
SNCA-207ENST00000502987 PCNX2A6NKB5 2137 aa11.21□□□□□ -0.62
SNCA-207ENST00000502987 AKAP13Q12802 2813 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 SPAARA0A1B0GVQ0 90 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 PIK3R2O00459 728 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 PSMA7O14818 248 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 TIMM44O43615 452 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 TOP3BO95985 862 aaKnown RBP11.2□□□□□ -0.62
SNCA-207ENST00000502987 EPHX1P07099 455 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 PROS1P07225 676 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 RGS7P49802 495 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 ZNF132P52740 706 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 SIM1P81133 766 aaPredicted RBP11.2□□□□□ -0.62
SNCA-207ENST00000502987 KCNC4Q03721 635 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 LRRC63Q05C16 580 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 CETN1Q12798 172 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 ZNF234Q14588 700 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 FNDC3BQ53EP0 1204 aaKnown RBP11.2□□□□□ -0.62
SNCA-207ENST00000502987 PEAR1Q5VY43 1037 aaPredicted RBP11.2□□□□□ -0.62
SNCA-207ENST00000502987 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 TMEM270Q6UE05 265 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 FAM124AQ86V42 546 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 PPM1KQ8N3J5 372 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 CPXM2Q8N436 756 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 OR2I1PQ8NGU4 316 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 SORCS1Q8WY21 1168 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 GOLGA1Q92805 767 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 TMA16Q96EY4 203 aaKnown RBP11.2□□□□□ -0.62
SNCA-207ENST00000502987 ZNF419Q96HQ0 510 aaPredicted RBP11.2□□□□□ -0.62
SNCA-207ENST00000502987 PIWIL1Q96J94 861 aaKnown RBP11.2□□□□□ -0.62
SNCA-207ENST00000502987 NT5C1BQ96P26 610 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 SLC2A11Q9BYW1 496 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 METTL14Q9HCE5 456 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms