RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 BRMS1LQ5PSV4 323 aa22.75■■□□□ 1.23
PTPN13-205ENST00000502971 UBAP2Q5T6F2 1119 aaKnown RBP22.75■■□□□ 1.23
PTPN13-205ENST00000502971 KCNT2Q6UVM3 1135 aa22.75■■□□□ 1.23
PTPN13-205ENST00000502971 PDZD4Q76G19 769 aaPredicted RBP22.75■■□□□ 1.23
PTPN13-205ENST00000502971 SH2D3CQ8N5H7 860 aa22.75■■□□□ 1.23
PTPN13-205ENST00000502971 VWCEQ96DN2 955 aa22.75■■□□□ 1.23
PTPN13-205ENST00000502971 PGM2Q96G03 612 aa22.75■■□□□ 1.23
PTPN13-205ENST00000502971 SAYSD1Q9NPB0 183 aa22.75■■□□□ 1.23
PTPN13-205ENST00000502971 RAD54BQ9Y620 910 aa22.75■■□□□ 1.23
PTPN13-205ENST00000502971 ABHD14A-ACY1A0A1B0GW23 586 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 I6L893 689 aaPredicted RBP22.74■■□□□ 1.23
PTPN13-205ENST00000502971 DCLK1O15075 740 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 ALOX15BO15296 676 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 IRAK2O43187 625 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 EFEMP2O95967 443 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 ABHD2P08910 425 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 PBX3P40426 434 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 ARL4CP56559 192 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 TPI1P60174 286 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 BASP1P80723 227 aaKnown RBP22.74■■□□□ 1.23
PTPN13-205ENST00000502971 TMEM173Q86WV6 379 aaPredicted RBP22.74■■□□□ 1.23
PTPN13-205ENST00000502971 ATAD1Q8NBU5 361 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 BCL7CQ8WUZ0 217 aaPredicted RBP22.74■■□□□ 1.23
PTPN13-205ENST00000502971 TFB1MQ8WVM0 346 aaKnown RBP22.74■■□□□ 1.23
PTPN13-205ENST00000502971 RNF34Q969K3 372 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 OSBPL2Q9H1P3 480 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 CWH43Q9H720 699 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 COMMD8Q9NX08 183 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 ARHGEF38Q9NXL2 777 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 MTMR11A4FU01 709 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 CHADO15335 359 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 GCATO75600 419 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 MAP3K6O95382 1288 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 GPR15P49685 360 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 ARPP19P56211 112 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 HIF1AQ16665 826 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 ANKRD22Q5VYY1 191 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 EPAS1Q99814 870 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 BCCIPQ9P287 314 aaKnown RBP eCLIP22.74■■□□□ 1.23
PTPN13-205ENST00000502971 MFHAS1Q9Y4C4 1052 aa22.74■■□□□ 1.23
PTPN13-205ENST00000502971 MKI67P46013 3256 aaKnown RBP22.73■■□□□ 1.23
PTPN13-205ENST00000502971 A0A1W2PQH9 124 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 C5orf60A6NFR6 353 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 FAM72CH0Y354 149 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 RASGRF2O14827 1237 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 MFSD11O43934 449 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 RTN3O95197 1032 aaPredicted RBP22.73■■□□□ 1.23
PTPN13-205ENST00000502971 RAG1P15918 1043 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 NRLP54845 237 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 SKOR1P84550 965 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 PDK1Q15118 436 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 FAM72AQ5TYM5 149 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 HEATR6Q6AI08 1181 aaKnown RBP22.73■■□□□ 1.23
PTPN13-205ENST00000502971 FAM72DQ6L9T8 149 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 PPP1R21Q6ZMI0 780 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 KDM7AQ6ZMT4 941 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 TAS1R1Q7RTX1 841 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 FAM72BQ86X60 149 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 TNS4Q8IZW8 715 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 UHMK1Q8TAS1 419 aaKnown RBP22.73■■□□□ 1.23
PTPN13-205ENST00000502971 TOP1MTQ969P6 601 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 SPATA17Q96L03 361 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 C9orf72Q96LT7 481 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 NMUR1Q9HB89 426 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 XPO7Q9UIA9 1087 aaKnown RBP22.73■■□□□ 1.23
PTPN13-205ENST00000502971 LTBP2Q14767 1821 aa22.73■■□□□ 1.23
PTPN13-205ENST00000502971 FAM92AA1XBS5 289 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 TRIM43BA6NCK2 446 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 TCEA3O75764 348 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 HAPLN1P10915 354 aaPredicted RBP22.72■■□□□ 1.23
PTPN13-205ENST00000502971 ERCC2P18074 760 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 NR1D1P20393 614 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 KCNJ11Q14654 390 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 USP41Q3LFD5 358 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 SDHAF4Q5VUM1 108 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 RSPO2Q6UXX9 243 aaPredicted RBP22.72■■□□□ 1.23
PTPN13-205ENST00000502971 TRIM43Q96BQ3 446 aaPredicted RBP22.72■■□□□ 1.23
PTPN13-205ENST00000502971 HAPLN3Q96S86 360 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 FERMT1Q9BQL6 677 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 CCDC77Q9BR77 488 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 FRMD8Q9BZ67 464 aaPredicted RBP22.72■■□□□ 1.23
PTPN13-205ENST00000502971 KLC2Q9H0B6 622 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 LRRC4CQ9HCJ2 640 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 PRDM5Q9NQX1 630 aaPredicted RBP22.72■■□□□ 1.23
PTPN13-205ENST00000502971 OR12D3Q9UGF7 316 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 PLXNA3P51805 1871 aa22.72■■□□□ 1.23
PTPN13-205ENST00000502971 A6NNZ2 444 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 PPP1R12AO14974 1030 aaPredicted RBP22.71■■□□□ 1.23
PTPN13-205ENST00000502971 AMHP03971 560 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 CCR1P32246 355 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 MAGEA6P43360 314 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 PDIA2Q13087 525 aaKnown RBP22.71■■□□□ 1.23
PTPN13-205ENST00000502971 CBLBQ13191 982 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 PPP2R5DQ14738 602 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 TUBB8Q3ZCM7 444 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 MFSD5Q6N075 450 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 MSANTD2Q6P1R3 559 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 RNF19BQ6ZMZ0 732 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 DENND5BQ6ZUT9 1274 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 RNF168Q8IYW5 571 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms