RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TBL3Q12788 808 aaKnown RBP5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 NFIL3Q16649 462 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 CYP1B1Q16678 543 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 DPY19L3Q6ZPD9 716 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 MYEOVQ96EZ4 313 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 FMNL2Q96PY5 1086 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 PRR25Q96S07 402 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 PDCL3Q9H2J4 239 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 TAOK3Q9H2K8 898 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 DEF6Q9H4E7 631 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 IL21RQ9HBE5 538 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 PDE11AQ9HCR9 933 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 KLC4Q9NSK0 619 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 MGAT4CQ9UBM8 478 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 ASAP1Q9ULH1 1129 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 SUFUQ9UMX1 484 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 GABRQQ9UN88 632 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 TCAF1Q9Y4C2 921 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 PCDHB2Q9Y5E7 798 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 ADGRA2Q96PE1 1338 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 TDRD9Q8NDG6 1382 aaKnown RBP5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 PI4KAP2A4QPH2 592 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 UNC119BA6NIH7 251 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 DHX16O60231 1041 aaKnown RBP5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 TULP3O75386 442 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 F9P00740 461 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 DLDP09622 509 aaKnown RBP5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 PEPDP12955 493 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 ACP5P13686 325 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 TGM1P22735 817 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZFP36P26651 326 aaKnown RBP5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 POLD2P49005 469 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 PDE1AP54750 535 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 FOXL2P58012 376 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 GUCY1B3Q02153 619 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 TP53BP2Q13625 1128 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 THOC5Q13769 683 aaKnown RBP5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 CAMK1Q14012 370 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 PRKD1Q15139 912 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 WDR93Q6P2C0 686 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 GPR149Q86SP6 731 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZNF276Q8N554 614 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 SIRT6Q8N6T7 355 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 PNPLA1Q8N8W4 532 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZMIZ2Q8NF64 920 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 GLMPQ8WWB7 406 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 ERP27Q96DN0 273 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 TRMT61AQ96FX7 289 aaKnown RBP5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 TEPSINQ96N21 525 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 NPAS1Q99742 590 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 PHF7Q9BWX1 381 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZCCHC4Q9H5U6 513 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 STN1Q9H668 368 aaKnown RBP5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 SAP30LQ9HAJ7 183 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 KRT84Q9NSB2 600 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 DKK3Q9UBP4 350 aa5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 CCNL1Q9UK58 526 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P3-201ENST00000502802 DBX1A6NMT0 343 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 AP4M1O00189 453 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 CES2O00748 559 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 TMPRSS11DO60235 418 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 LPXNO60711 386 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 NXPH3O95157 252 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 WEE2P0C1S8 567 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 NR4A1P22736 598 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 RPS6KB1P23443 525 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 PRKCHP24723 683 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 GGT5P36269 586 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 TPTEP56180 551 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 TAS2R50P59544 299 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 E2F1Q01094 437 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 BMPR2Q13873 1038 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 ERV3-1Q14264 604 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 PTPRRQ15256 657 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 SEC23BQ15437 767 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 FAM69AQ5T7M9 428 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 FAM205BPQ63HN1 556 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZNF585AQ6P3V2 769 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 PTCHD4Q6ZW05 846 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 TMTC3Q6ZXV5 915 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 H1FNTQ75WM6 255 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 LSM14AQ8ND56 463 aaKnown RBP5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 OR52L2PQ8NGH6 319 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 MASTLQ96GX5 879 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 PRR11Q96HE9 360 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 TIGD1Q96MW7 591 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 SDF4Q9BRK5 362 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 CINPQ9BW66 212 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 KLC2Q9H0B6 622 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 SYNPO2LQ9H987 977 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 PARPBPQ9NWS1 579 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 ENTPD2Q9Y5L3 495 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 SCRIBQ14160 1630 aa5.85□□□□□ -1.47
HMGB1P3-201ENST00000502802 CYP3A7-CYP3A51PA0A087WV96 503 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 WDR27A2RRH5 827 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 SH2D7A6NKC9 451 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 C3orf70A6NLC5 250 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 VWC2LB2RUY7 222 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 TSPAN4O14817 238 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 YY2O15391 372 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms