RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 TLE6Q9H808 572 aa17.1■□□□□ 0.33
VCAN-204ENST00000502527 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
VCAN-204ENST00000502527 MOCS1Q9NZB8 636 aa17.1■□□□□ 0.33
VCAN-204ENST00000502527 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 OPHN1O60890 802 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 VAV1P15498 845 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 CRHR1P34998 444 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 NOS2P35228 1153 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 GRIA1P42261 906 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 ADAM17P78536 824 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 MRPS5P82675 430 aaKnown RBP17.09■□□□□ 0.33
VCAN-204ENST00000502527 ACCSLQ4AC99 568 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 DCAF6Q58WW2 860 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 STEAP4Q687X5 459 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 SKA1Q96BD8 255 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 C7orf26Q96N11 449 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 LGMNQ99538 433 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 EIF2B3Q9NR50 452 aaKnown RBP17.09■□□□□ 0.33
VCAN-204ENST00000502527 RPL26L1Q9UNX3 145 aaKnown RBP17.09■□□□□ 0.33
VCAN-204ENST00000502527 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 MFHAS1Q9Y4C4 1052 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 SDR42E2A6NKP2 422 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 CCDC22O60826 627 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 FAM163BP0C2L3 166 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 NPR3P17342 541 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 PSEN2P49810 448 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 CRYBB1P53674 252 aaPredicted RBP17.09■□□□□ 0.33
VCAN-204ENST00000502527 IRF5Q13568 498 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 HIC1Q14526 733 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 PRAMEF19Q5SWL8 479 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 MROH9Q5TGP6 573 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 LRRC8BQ6P9F7 803 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 TIFABQ6ZNK6 161 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 TLK2Q86UE8 772 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 OSTM1Q86WC4 334 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 CCNJLQ8IV13 435 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 COLGALT1Q8NBJ5 622 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 FAM13CQ8NE31 585 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 ARMC2Q8NEN0 867 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 RAB3IL1Q8TBN0 382 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 RNF139Q8WU17 664 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 KCTD13Q8WZ19 329 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 NT5C3BQ969T7 300 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 E2F7Q96AV8 911 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 OXNAD1Q96HP4 312 aaPredicted RBP17.09■□□□□ 0.33
VCAN-204ENST00000502527 TRIM56Q9BRZ2 755 aaKnown RBP17.09■□□□□ 0.33
VCAN-204ENST00000502527 STAP1Q9ULZ2 295 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 CLEC11AQ9Y240 323 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 IPPQ9Y573 584 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 NUMBLQ9Y6R0 609 aa17.09■□□□□ 0.33
VCAN-204ENST00000502527 SF3B1O75533 1304 aaKnown RBP eCLIP17.09■□□□□ 0.33
VCAN-204ENST00000502527 GLTPD2A6NH11 291 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 MFSD11O43934 449 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 ALDH1A2O94788 518 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 EPHB2P29323 1055 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 SERPINB3P29508 390 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 GLUD2P49448 558 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 TMPRSS15P98073 1019 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 PDK1Q15118 436 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 CASC4Q6P4E1 433 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 NDUFAF2Q8N183 169 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 NDRG1Q92597 394 aaKnown RBP17.08■□□□□ 0.33
VCAN-204ENST00000502527 NSL1Q96IY1 281 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 NPY6RQ99463 290 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 LRRC4Q9HBW1 653 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 PCMTD2Q9NV79 361 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 SIRPGQ9P1W8 387 aa17.08■□□□□ 0.33
VCAN-204ENST00000502527 WDR27A2RRH5 827 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 HMX2A2RU54 273 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 RNF103O00237 685 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 BIRC5O15392 142 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 TREHO43280 583 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 PTPN1P18031 435 aaKnown RBP17.08■□□□□ 0.32
VCAN-204ENST00000502527 AP1B1Q10567 949 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 KRT72Q14CN4 511 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 WASHC2DQ5SRD0 308 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 NUDCD3Q8IVD9 361 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 NSMCE1Q8WV22 266 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 PTCD3Q96EY7 689 aaKnown RBP17.08■□□□□ 0.32
VCAN-204ENST00000502527 P2RY11Q96G91 374 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 KCNK4Q9NYG8 393 aa17.08■□□□□ 0.32
VCAN-204ENST00000502527 M0QYT0 321 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 HAS3O00219 553 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 CYB561D2O14569 222 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 PPP1R12AO14974 1030 aaPredicted RBP17.07■□□□□ 0.32
VCAN-204ENST00000502527 ZNF189O75820 626 aaPredicted RBP17.07■□□□□ 0.32
VCAN-204ENST00000502527 MYL2P10916 166 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 LRPAP1P30533 357 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 BST1Q10588 318 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 OTUD1Q5VV17 481 aaPredicted RBP17.07■□□□□ 0.32
VCAN-204ENST00000502527 TLDC1Q6P9B6 456 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 MARK2Q7KZI7 788 aaKnown RBP17.07■□□□□ 0.32
VCAN-204ENST00000502527 BNIPLQ7Z465 357 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 NME8Q8N427 588 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 PDCD7Q8N8D1 485 aaKnown RBP17.07■□□□□ 0.32
VCAN-204ENST00000502527 SMG8Q8ND04 991 aaKnown RBP17.07■□□□□ 0.32
VCAN-204ENST00000502527 CDKL2Q92772 493 aa17.07■□□□□ 0.32
VCAN-204ENST00000502527 RSRC1Q96IZ7 334 aaKnown RBP17.07■□□□□ 0.32
VCAN-204ENST00000502527 NAT9Q9BTE0 207 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms