RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 FAM237AA0A1B0GTK4 181 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 SH3BP5O60239 455 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 EPB41P11171 864 aaKnown RBP12.59□□□□□ -0.39
CNOT4-211ENST00000498534 IL12RB1P42701 662 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 MXI1P50539 228 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 TPMTP51580 245 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 RAD23BP54727 409 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 MCCD1P59942 119 aaPredicted RBP12.59□□□□□ -0.39
CNOT4-211ENST00000498534 ENPP2Q13822 863 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 MPPE1Q53F39 396 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 RAB41Q5JT25 222 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 PM20D1Q6GTS8 502 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 RNF139Q8WU17 664 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 SEMA4DQ92854 862 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 PLD4Q96BZ4 506 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
CNOT4-211ENST00000498534 SCAND2PQ9GZW5 306 aaPredicted RBP12.59□□□□□ -0.39
CNOT4-211ENST00000498534 MKRN2Q9H000 416 aaKnown RBP12.59□□□□□ -0.39
CNOT4-211ENST00000498534 LRRC4Q9HBW1 653 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 CD93Q9NPY3 652 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
CNOT4-211ENST00000498534 HESX1Q9UBX0 185 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 RALYQ9UKM9 306 aaKnown RBP12.59□□□□□ -0.39
CNOT4-211ENST00000498534 KLK13Q9UKR3 277 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 ASPMQ8IZT6 3477 aa12.59□□□□□ -0.39
CNOT4-211ENST00000498534 A0A1W2PQ27 194 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 A0A1W2PQ64 194 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 FAM221BA6H8Z2 402 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 SRRM3A6NNA2 597 aaPredicted RBP12.58□□□□□ -0.4
CNOT4-211ENST00000498534 METTL12A8MUP2 240 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 ZNF202O95125 648 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 EPHX1P07099 455 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 ZNF445P59923 1031 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 YWHAEP62258 255 aaKnown RBP12.58□□□□□ -0.4
CNOT4-211ENST00000498534 FAM193AP78312 1265 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 ZNF234Q14588 700 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 SGO2Q562F6 1265 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 TCERG1LQ5VWI1 586 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 SERPINA13PQ6UXR4 307 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 TATDN2Q93075 761 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 TMA16Q96EY4 203 aaKnown RBP12.58□□□□□ -0.4
CNOT4-211ENST00000498534 EEF2KMTQ96G04 330 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 CAMK1GQ96NX5 476 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 KIAA1257Q9ULG3 409 aa12.58□□□□□ -0.4
CNOT4-211ENST00000498534 HBS1LQ9Y450 684 aaKnown RBP12.58□□□□□ -0.4
CNOT4-211ENST00000498534 KCNJ18B7U540 433 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 XPO1O14980 1071 aaKnown RBP12.57□□□□□ -0.4
CNOT4-211ENST00000498534 BCAT2O15382 392 aaPredicted RBP12.57□□□□□ -0.4
CNOT4-211ENST00000498534 GJB3O75712 270 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 BCAT1P54687 386 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 PDE4CQ08493 712 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 GRIK2Q13002 908 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 TRIP4Q15650 581 aaPredicted RBP12.57□□□□□ -0.4
CNOT4-211ENST00000498534 ZCWPW2Q504Y3 356 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 DCAF12L1Q5VU92 463 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 BSPRYQ5W0U4 402 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 IL27RAQ6UWB1 636 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 RAB44Q7Z6P3 723 aaPredicted RBP12.57□□□□□ -0.4
CNOT4-211ENST00000498534 FMNL3Q8IVF7 1028 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 NAXDQ8IW45 347 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 SIX6OS1Q8N1H7 587 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 ZCCHC9Q8N567 271 aaKnown RBP12.57□□□□□ -0.4
CNOT4-211ENST00000498534 SETD7Q8WTS6 366 aaKnown RBP12.57□□□□□ -0.4
CNOT4-211ENST00000498534 P2RY11Q96G91 374 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 TSG101Q99816 390 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 ARID3AQ99856 593 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 ULBP1Q9BZM6 244 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 PCED1AQ9H1Q7 454 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 ABCC13Q9NSE7 274 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 RMND1Q9NWS8 449 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 CLEC4EQ9ULY5 219 aa12.57□□□□□ -0.4
CNOT4-211ENST00000498534 APOBEC2Q9Y235 224 aaKnown RBP12.57□□□□□ -0.4
CNOT4-211ENST00000498534 PCDH15Q96QU1 1955 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 TSPAN3O60637 253 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 CER1O95813 267 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 IGLV3-19P01714 112 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 CD19P15391 556 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 MATKP42679 507 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 BST2Q10589 180 aaKnown RBP12.56□□□□□ -0.4
CNOT4-211ENST00000498534 CUL2Q13617 745 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 GOLGA7BQ2TAP0 167 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 FNDC3BQ53EP0 1204 aaKnown RBP12.56□□□□□ -0.4
CNOT4-211ENST00000498534 DCAF17Q5H9S7 520 aaPredicted RBP12.56□□□□□ -0.4
CNOT4-211ENST00000498534 ADGRF1Q5T601 910 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 FAM124AQ86V42 546 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 FAM217AQ8IXS0 508 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 OR2T3Q8NH03 318 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 WFIKKN2Q8TEU8 576 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 ADAMTS14Q8WXS8 1223 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 SORCS1Q8WY21 1168 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
CNOT4-211ENST00000498534 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 EIF2B4Q9UI10 523 aaKnown RBP12.56□□□□□ -0.4
CNOT4-211ENST00000498534 TSPAN16Q9UKR8 245 aa12.56□□□□□ -0.4
CNOT4-211ENST00000498534 DSPP15924 2871 aaKnown RBP12.55□□□□□ -0.4
CNOT4-211ENST00000498534 DMXL2Q8TDJ6 3036 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 LATS1O95835 1130 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 ATP5BP06576 529 aaKnown RBP12.55□□□□□ -0.4
CNOT4-211ENST00000498534 FTH1P19P0C7X4 201 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 ZNF883P0CG24 379 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms