RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 C8orf49Q96NF6 230 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 JMJD8Q96S16 334 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 TUBB2BQ9BVA1 445 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CCDC94Q9BW85 323 aaPredicted RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 IMPG2Q9BZV3 1241 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 HAPLN2Q9GZV7 340 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 FAM49AQ9H0Q0 323 aaPredicted RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 MINDY3Q9H8M7 445 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 RPF1Q9H9Y2 349 aaKnown RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 PDE11AQ9HCR9 933 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 PTPRHQ9HD43 1115 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 LZTFL1Q9NQ48 299 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CHST7Q9NS84 486 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 C1orf112Q9NSG2 853 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 RNF19AQ9NV58 838 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 DLL3Q9NYJ7 618 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 HDAC6Q9UBN7 1215 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 DNAI1Q9UI46 699 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 CPSF3Q9UKF6 684 aaKnown RBP5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 PCDHA13Q9Y5I0 950 aa5.65□□□□□ -1.5
HMGXB4-208ENST00000498325 USP24Q9UPU5 2620 aa5.65□□□□□ -1.51
HMGXB4-208ENST00000498325 CNTNAP2Q9UHC6 1331 aa5.65□□□□□ -1.51
HMGXB4-208ENST00000498325 EVPLQ92817 2033 aa5.65□□□□□ -1.51
HMGXB4-208ENST00000498325 GVINP1Q7Z2Y8 2422 aa5.65□□□□□ -1.51
HMGXB4-208ENST00000498325 A0A1B0GUA9 196 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 CYSRT1A8MQ03 144 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 F8VZ95 297 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ARVCFO00192 962 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 FOXN3O00409 490 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 PJA2O43164 708 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 B4GALT4O60513 344 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TSPAN1O60635 241 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TACC1O75410 805 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 CLSTN1O94985 981 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF205O95201 554 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 HLA-DRAP01903 254 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 PF4P02776 101 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 EDN1P05305 212 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ASGR1P07306 291 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TMEM191BP0C7N4 346 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 STAG3L1P0CL83 205 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 C6P13671 934 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ARF4P18085 180 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TBXAS1P24557 533 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 CST5P28325 142 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 USP8P40818 1118 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 PIK3CAP42336 1068 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 YWHAEP62258 255 aaKnown RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 APBA1Q02410 837 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 GCNT1Q02742 428 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TRPC3Q13507 836 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 NAB2Q15742 525 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 KIZQ2M2Z5 673 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 SGSM1Q2NKQ1 1148 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ASTE1Q2TB18 679 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ZACNQ401N2 412 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM47CQ5HY64 1035 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF569Q5MCW4 686 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 EEF1DP3Q658K8 133 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ALKBH5Q6P6C2 394 aaKnown RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 NOTUMQ6P988 496 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 SLC27A1Q6PCB7 646 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 GJB7Q6PEY0 223 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 PAQR3Q6TCH7 311 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 C15orf39Q6ZRI6 1047 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TRAPPC11Q7Z392 1133 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TMCO2Q7Z6W1 182 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 NT5DC4Q86YG4 428 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 HERC6Q8IVU3 1022 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ARHGEF19Q8IW93 802 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 CARFQ8N187 725 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 RNF10Q8N5U6 811 aaKnown RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TTC9BQ8N6N2 239 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TAS1R2Q8TE23 839 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 DNAJB3Q8WWF6 145 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TAF4BQ92750 862 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ZBTB10Q96DT7 871 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 LOXL4Q96JB6 756 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ACAP3Q96P50 834 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 MENTQ9BUN1 341 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 C1QTNF3Q9BXJ4 246 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 IFIH1Q9BYX4 1025 aaKnown RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 CDT1Q9H211 546 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 HIPK3Q9H422 1215 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ASB7Q9H672 318 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TOPORSQ9NS56 1045 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 ADAMTS1Q9UHI8 967 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 MTUS1Q9ULD2 1270 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 GUCA1BQ9UMX6 200 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 HCFC2Q9Y5Z7 792 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 CACNA1HO95180 2353 aa5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 TPRP12270 2363 aaKnown RBP5.64□□□□□ -1.51
HMGXB4-208ENST00000498325 RIF1Q5UIP0 2472 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 CTAGE9A4FU28 777 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 B4GALT5O43286 388 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 XPOTO43592 962 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM189A1O60320 539 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 GPR32O75388 356 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 URI1O94763 535 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms