RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 GAD2Q05329 585 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 GRSF1Q12849 480 aaKnown RBP eCLIP11.71□□□□□ -0.53
ERCC8-208ENST00000497892 E4F1Q66K89 784 aaPredicted RBP11.71□□□□□ -0.53
ERCC8-208ENST00000497892 NUGGCQ68CJ6 796 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 OR6B2Q6IFH4 312 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 IRF2BP2Q7Z5L9 587 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 TAC4Q86UU9 113 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 C12orf40Q86WS4 652 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 ERICH1Q86X53 443 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 XYLT1Q86Y38 959 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 ETFBKMTQ8IXQ9 262 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 SYNPOQ8N3V7 929 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 CPXM2Q8N436 756 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 OLIG1Q8TAK6 271 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 CPA5Q8WXQ8 436 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 EZH1Q92800 747 aaPredicted RBP11.71□□□□□ -0.53
ERCC8-208ENST00000497892 C18orf8Q96DM3 657 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 IQCDQ96DY2 449 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 PCDHB18PQ96TA0 734 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 SYT11Q9BT88 431 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 NUP58Q9BVL2 599 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 XPO4Q9C0E2 1151 aaKnown RBP11.71□□□□□ -0.53
ERCC8-208ENST00000497892 LMAN1LQ9HAT1 526 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 RBM12Q9NTZ6 932 aaKnown RBP11.71□□□□□ -0.53
ERCC8-208ENST00000497892 RAPGEFL1Q9UHV5 662 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 STOML2Q9UJZ1 356 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 TLR6Q9Y2C9 796 aa11.71□□□□□ -0.53
ERCC8-208ENST00000497892 ITIH6Q6UXX5 1313 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.7□□□□□ -0.54
ERCC8-208ENST00000497892 NEDD8-MDP1E9PL57 170 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 IRAK2O43187 625 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 CACNG3O60359 315 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 TRUB2O95900 331 aaKnown RBP11.7□□□□□ -0.54
ERCC8-208ENST00000497892 EGFP01133 1207 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 UNGP13051 313 aaPredicted RBP11.7□□□□□ -0.54
ERCC8-208ENST00000497892 CHKAP35790 457 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 GCGRP47871 477 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 TBX4P57082 545 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 PITX1P78337 314 aaPredicted RBP11.7□□□□□ -0.54
ERCC8-208ENST00000497892 PRR20EP86478 221 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 PRR20CP86479 221 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 PRR20DP86480 221 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 PRR20BP86481 221 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 PRR20AP86496 221 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 TCF15Q12870 199 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 MTAPQ13126 283 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 EIF4EBP2Q13542 120 aaPredicted RBP11.7□□□□□ -0.54
ERCC8-208ENST00000497892 ASIC2Q16515 512 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 CLEC16AQ2KHT3 1053 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 ANO4Q32M45 955 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 DCAF6Q58WW2 860 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 PLA2G2CQ5R387 149 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 MMS22LQ6ZRQ5 1243 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 Q6ZS52 159 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 DEFB106AQ8N104 65 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 PHTF2Q8N3S3 785 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 ADAM32Q8TC27 787 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 SLC39A13Q96H72 371 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 FCRL2Q96LA5 508 aaPredicted RBP11.7□□□□□ -0.54
ERCC8-208ENST00000497892 AGPAT1Q99943 283 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 BBS2Q9BXC9 721 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 SPATA6Q9NWH7 488 aaPredicted RBP11.7□□□□□ -0.54
ERCC8-208ENST00000497892 AIPL1Q9NZN9 384 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 WDR35Q9P2L0 1181 aa11.7□□□□□ -0.54
ERCC8-208ENST00000497892 FAM170AA1A519 330 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 GFRA2O00451 464 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 CBFA2T2O43439 604 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 TULP3O75386 442 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 GRAP2O75791 330 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 PENKP01210 267 aaPredicted RBP11.69□□□□□ -0.54
ERCC8-208ENST00000497892 GYPCP04921 128 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 TYRP14679 529 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 PRKCIP41743 596 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 MATKP42679 507 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 NSFP46459 744 aaKnown RBP11.69□□□□□ -0.54
ERCC8-208ENST00000497892 SLC6A11P48066 632 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 MESP2Q0VG99 397 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 GAS6Q14393 721 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 ANGPT1Q15389 498 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 FBXO43Q4G163 708 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 ADGRF1Q5T601 910 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 FAM102AQ5T9C2 384 aaPredicted RBP11.69□□□□□ -0.54
ERCC8-208ENST00000497892 SFMBT2Q5VUG0 894 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 OTUD1Q5VV17 481 aaPredicted RBP11.69□□□□□ -0.54
ERCC8-208ENST00000497892 TPGS1Q6ZTW0 290 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 PHF13Q86YI8 300 aaPredicted RBP11.69□□□□□ -0.54
ERCC8-208ENST00000497892 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 UNC45BQ8IWX7 931 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 SLC30A5Q8TAD4 765 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 AZIN2Q96A70 460 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 THAP11Q96EK4 314 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 P2RY11Q96G91 374 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 PNKPQ96T60 521 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 C11orf70Q9BRQ4 267 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 NUCKS1Q9H1E3 243 aaKnown RBP11.69□□□□□ -0.54
ERCC8-208ENST00000497892 FAM204AQ9H8W3 233 aa11.69□□□□□ -0.54
ERCC8-208ENST00000497892 PRMT8Q9NR22 394 aaPredicted RBP11.69□□□□□ -0.54
ERCC8-208ENST00000497892 GOLGA8SH3BPF8 625 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms