RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 BORCS5Q969J3 196 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 SLC4A5Q9BY07 1137 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 NACA2Q9H009 215 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 RIMS3Q9UJD0 308 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 C7orf72A4D263 438 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 PLOD2O00469 737 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 SNNO75324 88 aaPredicted RBP13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 IDO1P14902 403 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 TRAF2Q12933 501 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 CCDC142Q17RM4 750 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 TRIM16LQ309B1 348 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 PERM1Q5SV97 790 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 ANGEL2Q5VTE6 544 aaKnown RBP13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 CYP2R1Q6VVX0 501 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 DCPSQ96C86 337 aaKnown RBP13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 TEKT3Q9BXF9 490 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 STK39Q9UEW8 545 aa13.45□□□□□ -0.26
GAPVD1-220ENST00000497580 RNASEH2AO75792 299 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 PSMD10O75832 226 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 ATE1O95260 518 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 PCYT1AP49585 367 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 RPS6P62753 249 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF252P-AS1Q0IIN9 211 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 TAF5Q15542 800 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 METTL21CQ5VZV1 264 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 DRICH1Q6PGQ1 229 aaPredicted RBP13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 CPXCR1Q8N123 301 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 PDCD6IPQ8WUM4 868 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 KLHL25Q9H0H3 589 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 C17orf75Q9HAS0 396 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 SORCS3Q9UPU3 1222 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 FAM32AQ9Y421 112 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 TTLL3Q9Y4R7 772 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 MAST2Q6P0Q8 1798 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 HLA-DRAP01903 254 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 CD247P20963 164 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 RCVRNP35243 200 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 RPL26P61254 145 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF423Q2M1K9 1284 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 SLC9B1Q4ZJI4 515 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 FSCBQ5H9T9 825 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 IL23RQ5VWK5 629 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 ADGRF2Q8IZF7 708 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 DSELQ8IZU8 1212 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 ABRAQ8N0Z2 381 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 NEURL2Q9BR09 285 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF358Q9NW07 568 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 COL18A1P39060 1754 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 ZBED1O96006 694 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 OSBPP22059 807 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 SHMT1P34896 483 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 RFC1P35251 1148 aaPredicted RBP13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 CLCN2P51788 898 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 MMRN1Q13201 1228 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 NEDD8Q15843 81 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 MTX3Q5HYI7 312 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 NANOGP8Q6NSW7 305 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 BORAQ6PGQ7 559 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 TNS4Q8IZW8 715 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 LZTR1Q8N653 840 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 GABPB2Q8TAK5 448 aaPredicted RBP13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 LRTOMTQ8WZ04 291 aa13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 ZMAT2Q96NC0 199 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-220ENST00000497580 E7ESA3 106 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 KCNN4O15554 427 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 STAM2O75886 525 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 CKMT2P17540 419 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 HSPA13P48723 471 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 ACOT2P49753 483 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 YWHAZP63104 245 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 TSPY1Q01534 308 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 ROR1Q01973 937 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 PRKG1Q13976 671 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 XKR9Q5GH70 373 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 TTC33Q6PID6 262 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 TMEM26Q6ZUK4 368 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 SETD3Q86TU7 594 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 KYQ8NBH2 561 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 CRYGNQ8WXF5 182 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 KLHL32Q96NJ5 620 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 NAA50Q9GZZ1 169 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 COG4Q9H9E3 785 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 IGLV3-22A0A075B6J6 115 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 SAC3D1A6NKF1 404 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 TPST1O60507 370 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 IL1BP01584 269 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 CRADDP78560 199 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 PPM1JQ5JR12 505 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 HPS1Q92902 700 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 OR52B2Q96RD2 323 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 GID8Q9NWU2 228 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 TEX264Q9Y6I9 313 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 NOL3O60936 208 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 TM4SF1P30408 202 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 CSE1LP55060 971 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 CARTPTQ16568 116 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 DPH6Q7L8W6 267 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms