RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 HEXIM2Q96MH2 286 aaKnown RBP6.41□□□□□ -1.38
SSBP1-213ENST00000496622 MCEEQ96PE7 176 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 CPXM1Q96SM3 734 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 TCF12Q99081 682 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 MRPL45Q9BRJ2 306 aaKnown RBP6.41□□□□□ -1.38
SSBP1-213ENST00000496622 TRIM51Q9BSJ1 452 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 DPEP3Q9H4B8 488 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 XPNPEP3Q9NQH7 507 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 ATAD3AQ9NVI7 634 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 PFDN2Q9UHV9 154 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 PTPN22Q9Y2R2 807 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 TIMM13Q9Y5L4 95 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-213ENST00000496622 PRUNE2Q8WUY3 3088 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 NCANO14594 1321 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 PLXNA1Q9UIW2 1896 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 A0A1W2PNR3 127 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 HTR3EA5X5Y0 456 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 H3BQF6 201 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 TLR3O15455 904 aaKnown RBP6.41□□□□□ -1.38
SSBP1-213ENST00000496622 KLHL41O60662 606 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 IGHA2P01877 340 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 CHRNA1P02708 482 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 RARBP10826 455 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 ANXA13P27216 316 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 CHKAP35790 457 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 RGS7P49802 495 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 FCGRTP55899 365 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 TAS2R40P59535 323 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 BPIFB4P59827 614 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 TUBB2AQ13885 445 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 CASP8Q14790 479 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 IFI16Q16666 785 aaKnown RBP6.41□□□□□ -1.38
SSBP1-213ENST00000496622 FAM187BQ17R55 369 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 PTPN20Q4JDL3 420 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 CEP85LQ5SZL2 805 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 SLC27A1Q6PCB7 646 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 CCNI2Q6ZMN8 369 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-213ENST00000496622 ENOSF1Q7L5Y1 443 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 FAM228AQ86W67 206 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 RHOT2Q8IXI1 618 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 FAM20CQ8IXL6 584 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 SLC4A11Q8NBS3 891 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 SOCS4Q8WXH5 440 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 PSKH2Q96QS6 385 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 FERD3LQ96RJ6 166 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 TUBB2BQ9BVA1 445 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 B3GNT5Q9BYG0 378 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 DPH5Q9H2P9 285 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 RHBDL2Q9NX52 303 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 CORO1CQ9ULV4 474 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-213ENST00000496622 GMEB1Q9Y692 573 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 CAPN7Q9Y6W3 813 aa6.41□□□□□ -1.38
SSBP1-213ENST00000496622 LOXHD1Q8IVV2 1947 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 SMIM28A0A1B0GU29 152 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 GOLGA6L7A0A1B0GV03 622 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 SMIM35A0A1B0GVV1 85 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 RRN3P2A6NIE6 340 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 F8W810 466 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 I3L4J1 428 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 PGRMC1O00264 195 aaKnown RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 DUSP11O75319 330 aaKnown RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 SLC4A1P02730 911 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 GHRP10912 638 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 KRT10P13645 584 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 DDX5P17844 614 aaKnown RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 CYP3A5P20815 502 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 TBXAS1P24557 533 aaPredicted RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 RFC1P35251 1148 aaPredicted RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 ETFBP38117 255 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 THPOP40225 353 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 AP2B1P63010 937 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 SP3Q02447 781 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 ZNF252P-AS1Q0IIN9 211 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 PTP4A2Q12974 167 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 UBXN11Q5T124 520 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 NOTUMQ6P988 496 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 C16orf54Q6UWD8 224 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 B4GALNT4Q76KP1 1039 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 BZW1Q7L1Q6 419 aaKnown RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 SYCE1Q8N0S2 351 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 UBR7Q8N806 425 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 JOSD2Q8TAC2 188 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 HASPINQ8TF76 798 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 C1orf54Q8WWF1 131 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 RBM14Q96PK6 669 aaKnown RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 ZCCHC2Q9C0B9 1178 aaKnown RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 NSRP1Q9H0G5 558 aaKnown RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 NEUROG2Q9H2A3 272 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 PCDH12Q9NPG4 1184 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 HPS4Q9NQG7 708 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 PCMTD2Q9NV79 361 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 STIM2Q9P246 746 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 SAE1Q9UBE0 346 aaPredicted RBP6.4□□□□□ -1.38
SSBP1-213ENST00000496622 LNPEPQ9UIQ6 1025 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 ST3GAL5Q9UNP4 418 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 IPPQ9Y573 584 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 CDY2AQ9Y6F7 541 aa6.4□□□□□ -1.38
SSBP1-213ENST00000496622 DAPK3O43293 454 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 ACSL4O60488 711 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 CLASP2O75122 1294 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms