RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PEAR1Q5VY43 1037 aaPredicted RBP14.89□□□□□ -0.03
VTI1A-209ENST00000496445 SDE2Q6IQ49 451 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 DENND1BQ6P3S1 775 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 GJB7Q6PEY0 223 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 IRF2BP1Q8IU81 584 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 MRGPRX1Q96LB2 322 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 CRACR2AQ9BSW2 395 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 ACP6Q9NPH0 428 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 CYTH4Q9UIA0 394 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 CYP8B1Q9UNU6 501 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 STON1Q9Y6Q2 735 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 EPG5Q9HCE0 2579 aa14.89□□□□□ -0.03
VTI1A-209ENST00000496445 KMT2BQ9UMN6 2715 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-209ENST00000496445 KHNYNO15037 678 aaKnown RBP14.88□□□□□ -0.03
VTI1A-209ENST00000496445 FBXO21O94952 628 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 ITPKAP23677 461 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 HLA-FP30511 346 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 RPL6Q02878 288 aaKnown RBP14.88□□□□□ -0.03
VTI1A-209ENST00000496445 FUT11Q495W5 492 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 FAM133BQ5BKY9 247 aaKnown RBP14.88□□□□□ -0.03
VTI1A-209ENST00000496445 LYSMD4Q5XG99 296 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 TRIM65Q6PJ69 517 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 DEFB119Q8N690 84 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 SPDYE1Q8NFV5 336 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-209ENST00000496445 SORCS1Q8WY21 1168 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 DDX1Q92499 740 aaKnown RBP14.88□□□□□ -0.03
VTI1A-209ENST00000496445 LSM14BQ9BX40 385 aaKnown RBP14.88□□□□□ -0.03
VTI1A-209ENST00000496445 SLC2A11Q9BYW1 496 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 MIS12Q9H081 205 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 UBE2TQ9NPD8 197 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-209ENST00000496445 CHMP5Q9NZZ3 219 aa14.88□□□□□ -0.03
VTI1A-209ENST00000496445 EVLQ9UI08 416 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-209ENST00000496445 TPRP12270 2363 aaKnown RBP14.87□□□□□ -0.03
VTI1A-209ENST00000496445 ASCC3Q8N3C0 2202 aaKnown RBP14.87□□□□□ -0.03
VTI1A-209ENST00000496445 GOLGA6L7A0A1B0GV03 622 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 C4orf47A7E2U8 309 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 BECN2A8MW95 431 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 CDX4O14627 284 aaPredicted RBP14.87□□□□□ -0.03
VTI1A-209ENST00000496445 AP5Z1O43299 807 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 FGFR1OPO95684 399 aaKnown RBP14.87□□□□□ -0.03
VTI1A-209ENST00000496445 KRT5P13647 590 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 SLC9A1P19634 815 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 PRKCHP24723 683 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 SLC6A4P31645 630 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 IRX4P78413 519 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 ZNF234Q14588 700 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 EIF4HQ15056 248 aaKnown RBP14.87□□□□□ -0.03
VTI1A-209ENST00000496445 MEA1Q16626 185 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 MPPE1Q53F39 396 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 TRIM61Q5EBN2 209 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 ADGRF1Q5T601 910 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 SLC36A4Q6YBV0 504 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 SYT12Q8IV01 421 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 SLC41A1Q8IVJ1 513 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 WFDC5Q8TCV5 224 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 DQX1Q8TE96 717 aaKnown RBP14.87□□□□□ -0.03
VTI1A-209ENST00000496445 FCRL2Q96LA5 508 aaPredicted RBP14.87□□□□□ -0.03
VTI1A-209ENST00000496445 MKRN2Q9H000 416 aaKnown RBP14.87□□□□□ -0.03
VTI1A-209ENST00000496445 ELOVL2Q9NXB9 296 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 AJAP1Q9UKB5 411 aaPredicted RBP14.87□□□□□ -0.03
VTI1A-209ENST00000496445 PILRBQ9UKJ0 227 aa14.87□□□□□ -0.03
VTI1A-209ENST00000496445 NPC1O15118 1278 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 ZNF217O75362 1048 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 KCNK5O95279 499 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 NCAM1P13591 858 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 GNA15P30679 374 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 COPAP53621 1224 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 ZNF445P59923 1031 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 RING1Q06587 406 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 STARD3Q14849 445 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 NADSYN1Q6IA69 706 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 RFWD3Q6PCD5 774 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 KIAA1324Q6UXG2 1013 aaKnown RBP14.86□□□□□ -0.03
VTI1A-209ENST00000496445 SCUBE3Q8IX30 993 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.86□□□□□ -0.03
VTI1A-209ENST00000496445 ZNF606Q8WXB4 792 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 MYEOVQ96EZ4 313 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 PRICKLE1Q96MT3 831 aaPredicted RBP14.86□□□□□ -0.03
VTI1A-209ENST00000496445 SLC4A5Q9BY07 1137 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 CIPCQ9C0C6 399 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 CLSTN2Q9H4D0 955 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 TMEM9BQ9NQ34 198 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 ST7Q9NRC1 585 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 USP36Q9P275 1121 aaKnown RBP14.86□□□□□ -0.03
VTI1A-209ENST00000496445 TJP2Q9UDY2 1190 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 NAALADL1Q9UQQ1 740 aa14.86□□□□□ -0.03
VTI1A-209ENST00000496445 MAP1BP46821 2468 aaKnown RBP14.85□□□□□ -0.03
VTI1A-209ENST00000496445 CACNA1EQ15878 2313 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 KCNJ18B7U540 433 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 E5RJQ4 531 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 PAPSS1O43252 624 aaPredicted RBP14.85□□□□□ -0.03
VTI1A-209ENST00000496445 ACSL4O60488 711 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 LETM1O95202 739 aaPredicted RBP14.85□□□□□ -0.03
VTI1A-209ENST00000496445 TBX4P57082 545 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 ZNF33AQ06730 810 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 PIK3R6Q5UE93 754 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 NUGGCQ68CJ6 796 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 SLC23A3Q6PIS1 610 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 ENOSF1Q7L5Y1 443 aa14.85□□□□□ -0.03
VTI1A-209ENST00000496445 KIAA0907Q7Z7F0 614 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms