RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 METTL3Q86U44 580 aaKnown RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 CLEC4CQ8WTT0 213 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 ZNF606Q8WXB4 792 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 ERLEC1Q96DZ1 483 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 MRGPRX1Q96LB2 322 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 DDX50Q9BQ39 737 aaKnown RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 CRACR2AQ9BSW2 395 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 EDEM2Q9BV94 578 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 NUSAP1Q9BXS6 441 aaKnown RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 IRX2Q9BZI1 471 aaPredicted RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 CIPCQ9C0C6 399 aa13.28□□□□□ -0.28
PTPRF-214ENST00000496043 EVLQ9UI08 416 aaPredicted RBP13.28□□□□□ -0.28
PTPRF-214ENST00000496043 DMXL1Q9Y485 3027 aa13.27□□□□□ -0.28
PTPRF-214ENST00000496043 IGHV1OR15-9A0A0B4J2B8 117 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 PATE3B3GLJ2 98 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 MSI1O43347 362 aaKnown RBP13.27□□□□□ -0.29
PTPRF-214ENST00000496043 THAP12O43422 761 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 ACSL4O60488 711 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 NDUFS2O75306 463 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 ADRB1P08588 477 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 NCAM1P13591 858 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 SLC9A1P19634 815 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 KCNA4P22459 653 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 USP8P40818 1118 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 IL12RB1P42701 662 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 MTIF2P46199 727 aaKnown RBP13.27□□□□□ -0.29
PTPRF-214ENST00000496043 RING1Q06587 406 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 ZNF33AQ06730 810 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 LMAN2Q12907 356 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 ENPP2Q13822 863 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 ZNF234Q14588 700 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 MEA1Q16626 185 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 EXOC3L4Q17RC7 722 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 SMYD5Q6GMV2 418 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 DENND1BQ6P3S1 775 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 KIAA1324Q6UXG2 1013 aaKnown RBP13.27□□□□□ -0.29
PTPRF-214ENST00000496043 DEFB119Q8N690 84 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 CEP76Q8TAP6 659 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 WFIKKN2Q8TEU8 576 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 MED15Q96RN5 788 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 TRIM62Q9BVG3 475 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 SLC4A5Q9BY07 1137 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 PRDM16Q9HAZ2 1276 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 TMEM9BQ9NQ34 198 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 TMEM74BQ9NUR3 256 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 CYP8B1Q9UNU6 501 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 PLA2G4CQ9UP65 541 aa13.27□□□□□ -0.29
PTPRF-214ENST00000496043 GOLGA6L7A0A1B0GV03 622 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 LNP1A1A4G5 178 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 GTPBP10A4D1E9 387 aaKnown RBP13.26□□□□□ -0.29
PTPRF-214ENST00000496043 CAPN9O14815 690 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 IRAK2O43187 625 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 IGLV3-27P01718 113 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 FYNP06241 537 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 ITPKAP23677 461 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 HOXD9P28356 352 aaPredicted RBP13.26□□□□□ -0.29
PTPRF-214ENST00000496043 GNA15P30679 374 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 HOXD12P35452 270 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 ARHGAP44Q17R89 818 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 DUOXA1Q1HG43 343 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 FUT11Q495W5 492 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 TRIM61Q5EBN2 209 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 MPP7Q5T2T1 576 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 PIK3R6Q5UE93 754 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 TMEM215Q68D42 235 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 GJB7Q6PEY0 223 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 SLC23A3Q6PIS1 610 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 TRIM65Q6PJ69 517 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 THADAQ6YHU6 1953 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 BEND5Q7L4P6 421 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 RABEPKQ7Z6M1 372 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 TMEM110Q86TL2 294 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 TMPRSS6Q8IU80 811 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 IRF2BP1Q8IU81 584 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 FAM149B1Q96BN6 582 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 SERPINB11Q96P15 392 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 SLC6A17Q9H1V8 727 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 CLSTN2Q9H4D0 955 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 ITM2CQ9NQX7 267 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 PILRBQ9UKJ0 227 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 NAALADL1Q9UQQ1 740 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 TLR6Q9Y2C9 796 aa13.26□□□□□ -0.29
PTPRF-214ENST00000496043 CDX4O14627 284 aaPredicted RBP13.25□□□□□ -0.29
PTPRF-214ENST00000496043 TBL1XO60907 577 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 KCNK5O95279 499 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 ATP5BP06576 529 aaKnown RBP13.25□□□□□ -0.29
PTPRF-214ENST00000496043 EPHX1P07099 455 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 ACADMP11310 421 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 PON1P27169 355 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 CD6P30203 668 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 HLA-FP30511 346 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 OXTRP30559 389 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 YWHAZP63104 245 aaKnown RBP13.25□□□□□ -0.29
PTPRF-214ENST00000496043 SYCP2LQ5T4T6 812 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 RFWD3Q6PCD5 774 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 SERPINA13PQ6UXR4 307 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 CHST9Q7L1S5 443 aa13.25□□□□□ -0.29
PTPRF-214ENST00000496043 KIAA0907Q7Z7F0 614 aaPredicted RBP13.25□□□□□ -0.29
PTPRF-214ENST00000496043 FAM114A1Q8IWE2 563 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms