RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 SCD5Q86SK9 330 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 FAM124AQ86V42 546 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 C12orf29Q8N999 325 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 TMEM174Q8WUU8 243 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 SNX19Q92543 992 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 TSC1Q92574 1164 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 HPS3Q969F9 1004 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 FCRL3Q96P31 734 aaPredicted RBP14.1□□□□□ -0.15
COL1A1-209ENST00000495677 PANK2Q9BZ23 570 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 NUDT5Q9UKK9 219 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 AGO1Q9UL18 857 aaKnown RBP14.1□□□□□ -0.15
COL1A1-209ENST00000495677 CLEC4EQ9ULY5 219 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 NAV2Q8IVL1 2488 aa14.1□□□□□ -0.15
COL1A1-209ENST00000495677 NYNRINQ9P2P1 1898 aaKnown RBP14.1□□□□□ -0.15
COL1A1-209ENST00000495677 TDRD6O60522 2096 aaKnown RBP14.1□□□□□ -0.15
COL1A1-209ENST00000495677 J3QKU1 62 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 STX6O43752 255 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 RFPL3O75679 317 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 VNN1O95497 513 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 LDOC1O95751 146 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-209ENST00000495677 RPN1P04843 607 aaKnown RBP14.09□□□□□ -0.15
COL1A1-209ENST00000495677 CYP2J2P51589 502 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 BCAT1P54687 386 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 AMPD3Q01432 767 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 CFHR1Q03591 330 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 EHHADHQ08426 723 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 ILKQ13418 452 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 FBXL19Q6PCT2 694 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 PCSK4Q6UW60 755 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 KIAA0907Q7Z7F0 614 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-209ENST00000495677 PLEKHO2Q8TD55 490 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 TAF4BQ92750 862 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 FGF11Q92914 225 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 CYFIP2Q96F07 1278 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 ELF4Q99607 663 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-209ENST00000495677 CIPCQ9C0C6 399 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 CUEDC2Q9H467 287 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 SCML1Q9UN30 329 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 PLA2G4CQ9UP65 541 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 AK5Q9Y6K8 562 aa14.09□□□□□ -0.15
COL1A1-209ENST00000495677 MYO18BQ8IUG5 2567 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 MAST4O15021 2626 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 A0A1W2PPC4 97 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 C10orf142B7Z368 130 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 YKT6O15498 198 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 CORO1AP31146 461 aaKnown RBP14.08□□□□□ -0.16
COL1A1-209ENST00000495677 RPS14P62263 151 aaKnown RBP14.08□□□□□ -0.16
COL1A1-209ENST00000495677 SEMG2Q02383 582 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 ARID5AQ03989 594 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 INCA1Q0VD86 236 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 TARDBPQ13148 414 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL1A1-209ENST00000495677 BIRC3Q13489 604 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 SLC39A14Q15043 492 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 FAM26FQ5R3K3 315 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 USP30Q70CQ3 517 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 ADAT2Q7Z6V5 191 aaKnown RBP14.08□□□□□ -0.16
COL1A1-209ENST00000495677 SAP25Q8TEE9 199 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 WFIKKN2Q8TEU8 576 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 SORCS1Q8WY21 1168 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 GOLGA1Q92805 767 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 SKA1Q96BD8 255 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 CNDP2Q96KP4 475 aaKnown RBP14.08□□□□□ -0.16
COL1A1-209ENST00000495677 ACE2Q9BYF1 805 aaPredicted RBP14.08□□□□□ -0.16
COL1A1-209ENST00000495677 FAM49BQ9NUQ9 324 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 SUN2Q9UH99 717 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 NAGPAQ9UK23 515 aa14.08□□□□□ -0.16
COL1A1-209ENST00000495677 LRRIQ3A6PVS8 624 aaPredicted RBP14.07□□□□□ -0.16
COL1A1-209ENST00000495677 ERVH48-1M5A8F1 160 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 DNTTP04053 509 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 IGHV4-34P06331 123 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 CASP4P49662 377 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 ACADVLP49748 655 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 ZNF445P59923 1031 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 SHBQ15464 509 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 E2F4Q16254 413 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 ZACNQ401N2 412 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 MPPE1Q53F39 396 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 CCDC157Q569K6 752 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 KIAA0895LQ68EN5 471 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL1A1-209ENST00000495677 DDI1Q8WTU0 396 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 RFFLQ8WZ73 363 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 C7orf25Q9BPX7 421 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 DUSP16Q9BY84 665 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 UBXN6Q9BZV1 441 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 PRSS16Q9NQE7 514 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 TFIP11Q9UBB9 837 aaKnown RBP14.07□□□□□ -0.16
COL1A1-209ENST00000495677 HMGXB4Q9UGU5 601 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 STOML2Q9UJZ1 356 aa14.07□□□□□ -0.16
COL1A1-209ENST00000495677 IKBKBO14920 756 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 EXOC3O60645 756 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 FSBPO95073 299 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 CD2BP2O95400 341 aaKnown RBP14.06□□□□□ -0.16
COL1A1-209ENST00000495677 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
COL1A1-209ENST00000495677 ITGAVP06756 1048 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 HOXD9P28356 352 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-209ENST00000495677 ADORA2BP29275 332 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 HLA-FP30511 346 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 ACTN2P35609 894 aa14.06□□□□□ -0.16
COL1A1-209ENST00000495677 C21orf59P57076 290 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms