RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 RFX2P48378 723 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 DSCR9P59020 149 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 KCNAB1Q14722 419 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 WASHC2DQ5SRD0 308 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 C6orf10Q5SRN2 563 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 MANEALQ5VSG8 457 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 PLAG1Q6DJT9 500 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 FBXL22Q6P050 247 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 TRILQ7L0X0 811 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 MBD3L2Q8NHZ7 208 aaPredicted RBP4.58□□□□□ -1.68
VPS50-219ENST00000495039 TMEM255BQ8WV15 326 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 AKAP1Q92667 903 aaKnown RBP eCLIP4.58□□□□□ -1.68
VPS50-219ENST00000495039 CENPIQ92674 756 aaPredicted RBP4.58□□□□□ -1.68
VPS50-219ENST00000495039 PHF21BQ96EK2 531 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 LRGUKQ96M69 825 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 SELENOOQ9BVL4 669 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 C6orf106Q9H6K1 298 aaPredicted RBP4.58□□□□□ -1.68
VPS50-219ENST00000495039 TASP1Q9H6P5 420 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 VPS4AQ9UN37 437 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 HPSEQ9Y251 543 aa4.58□□□□□ -1.68
VPS50-219ENST00000495039 SPATA31A5Q5VU36 1347 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 SPATA31A7Q8IWB4 1347 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 A6NNC1 897 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 ZNF432O94892 652 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 IL1R1P14778 569 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 NDUFS1P28331 727 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 RPS16P62249 146 aaKnown RBP4.57□□□□□ -1.68
VPS50-219ENST00000495039 GAD2Q05329 585 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 MTAPQ13126 283 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 AASDHQ4L235 1098 aaPredicted RBP4.57□□□□□ -1.68
VPS50-219ENST00000495039 C3orf38Q5JPI3 329 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 ISM2Q6H9L7 571 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 OVCH2Q7RTZ1 564 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 TMEM174Q8WUU8 243 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 STAG1Q8WVM7 1258 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 IPCEF1Q8WWN9 437 aaPredicted RBP4.57□□□□□ -1.68
VPS50-219ENST00000495039 GJA10Q969M2 543 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 EME1Q96AY2 570 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 SEZ6LQ9BYH1 1024 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 RHOBTB2Q9BYZ6 727 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 CHST8Q9H2A9 424 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 INSL5Q9Y5Q6 135 aa4.57□□□□□ -1.68
VPS50-219ENST00000495039 EMSYQ7Z589 1322 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 FRS3O43559 492 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 HOXC6P09630 235 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 BTF3P20290 206 aaKnown RBP4.56□□□□□ -1.68
VPS50-219ENST00000495039 YY1P25490 414 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 ACOX1Q15067 660 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 CNGA2Q16280 664 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 GLE1Q53GS7 698 aaKnown RBP4.56□□□□□ -1.68
VPS50-219ENST00000495039 INO80DQ53TQ3 878 aaPredicted RBP4.56□□□□□ -1.68
VPS50-219ENST00000495039 OTUD3Q5T2D3 398 aaPredicted RBP4.56□□□□□ -1.68
VPS50-219ENST00000495039 RTL10Q7L3V2 364 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 ARL14EPQ8N8R7 260 aaPredicted RBP4.56□□□□□ -1.68
VPS50-219ENST00000495039 LMO3Q8TAP4 145 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 TM6SF1Q9BZW5 370 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 AAMDCQ9H7C9 122 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 RMI1Q9H9A7 625 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 ITGB1BP2Q9UKP3 347 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 TPCN1Q9ULQ1 816 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 PCDHB2Q9Y5E7 798 aa4.56□□□□□ -1.68
VPS50-219ENST00000495039 CFAP69A5D8W1 941 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 DPPA5A6NC42 116 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 NTN3O00634 580 aaPredicted RBP4.55□□□□□ -1.68
VPS50-219ENST00000495039 PLGP00747 810 aaPredicted RBP4.55□□□□□ -1.68
VPS50-219ENST00000495039 IFNA2P01563 188 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 AKR1A1P14550 325 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 MATN1P21941 496 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 GAB1Q13480 694 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 KCNJ12Q14500 433 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 PGM5Q15124 567 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 IZUMO4Q1ZYL8 232 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 LIPMQ5VYY2 423 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 APOA5Q6Q788 366 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 DDIASQ8IXT1 998 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 ZNF845Q96IR2 970 aaPredicted RBP4.55□□□□□ -1.68
VPS50-219ENST00000495039 FAM227BQ96M60 508 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 TRIM2Q9C040 744 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 TMEM60Q9H2L4 133 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 ERVK-5Q9HDB9 667 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 UTS2RQ9UKP6 389 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 CAPN11Q9UMQ6 739 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 PCDHGB1Q9Y5G3 927 aa4.55□□□□□ -1.68
VPS50-219ENST00000495039 E2F8A0AVK6 867 aa4.54□□□□□ -1.68
VPS50-219ENST00000495039 LDB3O75112 727 aa4.54□□□□□ -1.68
VPS50-219ENST00000495039 MAP4K4O95819 1239 aaPredicted RBP4.54□□□□□ -1.68
VPS50-219ENST00000495039 ENO1P06733 434 aaKnown RBP4.54□□□□□ -1.68
VPS50-219ENST00000495039 MYBP10242 640 aa4.54□□□□□ -1.68
VPS50-219ENST00000495039 PKMP14618 531 aaKnown RBP4.54□□□□□ -1.68
VPS50-219ENST00000495039 ZNF84P51523 738 aa4.54□□□□□ -1.68
VPS50-219ENST00000495039 ART1P52961 327 aa4.54□□□□□ -1.68
VPS50-219ENST00000495039 ROR2Q01974 943 aaKnown RBP4.54□□□□□ -1.68
VPS50-219ENST00000495039 PIN1Q13526 163 aaPredicted RBP4.54□□□□□ -1.68
VPS50-219ENST00000495039 CNN3Q15417 329 aaKnown RBP4.54□□□□□ -1.68
VPS50-219ENST00000495039 RHPN2Q8IUC4 686 aa4.54□□□□□ -1.68
VPS50-219ENST00000495039 SUN3Q8TAQ9 357 aa4.54□□□□□ -1.68
VPS50-219ENST00000495039 ZFPM2Q8WW38 1151 aa4.54□□□□□ -1.68
VPS50-219ENST00000495039 SIRT3Q9NTG7 399 aaPredicted RBP4.54□□□□□ -1.68
VPS50-219ENST00000495039 COL20A1Q9P218 1284 aa4.54□□□□□ -1.68
VPS50-219ENST00000495039 TRIP12Q14669 1992 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms