RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 SLC45A4Q5BKX6 768 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 EFHC1Q5JVL4 640 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 MRPL10Q7Z7H8 261 aaKnown RBP10.74□□□□□ -0.69
SAMM50-206ENST00000494795 RSPH3Q86UC2 560 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 DENND1AQ8TEH3 1009 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 P2RY11Q96G91 374 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 OLFM3Q96PB7 478 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 SLC2A13Q96QE2 648 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 TGS1Q96RS0 853 aaKnown RBP10.74□□□□□ -0.69
SAMM50-206ENST00000494795 TSPYL1Q9H0U9 437 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 NDFIP2Q9NV92 336 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 OSER1Q9NX31 292 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.74□□□□□ -0.69
SAMM50-206ENST00000494795 UBP1Q9NZI7 540 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 MAD1L1Q9Y6D9 718 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 TDRD15B5MCY1 1934 aaKnown RBP10.74□□□□□ -0.69
SAMM50-206ENST00000494795 E2F8A0AVK6 867 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 BCLAF3A2AJT9 711 aaKnown RBP10.74□□□□□ -0.69
SAMM50-206ENST00000494795 CCDC78A2IDD5 438 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 NT5C1B-RDH14C9J2C7 533 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 DGKIO75912 1065 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 TAC1P20366 129 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 NOS2P35228 1153 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 GEMIN4P57678 1058 aaKnown RBP10.74□□□□□ -0.69
SAMM50-206ENST00000494795 GPNMBQ14956 572 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 PIGWQ7Z7B1 504 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 ECHDC2Q86YB7 292 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 PARP9Q8IXQ6 854 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 MICALL1Q8N3F8 863 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 ANKLE1Q8NAG6 615 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 CKAP2Q8WWK9 683 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 PTPRN2Q92932 1015 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 RMDN2Q96LZ7 410 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 APOL2Q9BQE5 337 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 GIT1Q9Y2X7 761 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 TTLL3Q9Y4R7 772 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 NUMBLQ9Y6R0 609 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 CHD7Q9P2D1 2997 aa10.74□□□□□ -0.69
SAMM50-206ENST00000494795 SHROOM3Q8TF72 1996 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 TYROBPO43914 113 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 CSH1P0DML2 217 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 CSH2P0DML3 217 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 SRGAP2BP0DMP2 458 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ERCC2P18074 760 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 PSMB4P28070 264 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 GRK4P32298 578 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 STX2P32856 288 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ACADSBP45954 432 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 WASHC5Q12768 1159 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 RAB41Q5JT25 222 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ANKRD20A2Q5SQ80 823 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ANKRD20A1Q5TYW2 823 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ANKRD20A3Q5VUR7 823 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 STRADAQ7RTN6 431 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 TAC4Q86UU9 113 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 PACS2Q86VP3 889 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 PPM1NQ8N819 430 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ATP11CQ8NB49 1132 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 RSPH1Q8WYR4 309 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 RTP4Q96DX8 246 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 PKMYT1Q99640 499 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 SIK2Q9H0K1 926 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ACSS3Q9H6R3 686 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 HMX2A2RU54 273 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ASMTLO95671 621 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 CA4P22748 312 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 RDXP35241 583 aaKnown RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ADRA1BP35368 520 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 MNX1P50219 401 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 SESN2P58004 480 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 DDR2Q16832 855 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 GKAP1Q5VSY0 366 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 UNC5AQ6ZN44 842 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 RFX8Q6ZV50 586 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ZNF598Q86UK7 904 aaKnown RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 CTAGE3PQ8IX95 158 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 CACNA2D3Q8IZS8 1091 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 HTR3CQ8WXA8 447 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 KCTD13Q8WZ19 329 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 CAPNS2Q96L46 248 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 SIGLEC10Q96LC7 697 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 TKTL2Q9H0I9 626 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 SLC38A7Q9NVC3 462 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 WDR27A2RRH5 827 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 RNF103O00237 685 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 LTFP02788 710 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 DPYSQ14117 519 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 FAM133BQ5BKY9 247 aaKnown RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 LHX8Q68G74 356 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 PCGF5Q86SE9 256 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 TMEM173Q86WV6 379 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ZNF567Q8N184 647 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 TCP10LQ8TDR4 215 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ATP2A3Q93084 1043 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 QKIQ96PU8 341 aaKnown RBP eCLIP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 CCDC77Q9BR77 488 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 DHRS4Q9BTZ2 278 aa10.73□□□□□ -0.69
SAMM50-206ENST00000494795 FAM124BQ9H5Z6 455 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-206ENST00000494795 NMUR1Q9HB89 426 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms