RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 TNFAIP3P21580 790 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 TIE1P35590 1138 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 SCNN1AP37088 669 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 PITX1P78337 314 aaPredicted RBP16.56■□□□□ 0.24
LIME1-209ENST00000494776 MRPS21P82921 87 aaKnown RBP16.56■□□□□ 0.24
LIME1-209ENST00000494776 MESP2Q0VG99 397 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 NME3Q13232 169 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 FYB2Q5VWT5 728 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 MMS22LQ6ZRQ5 1243 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 SFTPA1Q8IWL2 248 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 FAM217AQ8IXS0 508 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 ATP6V0D2Q8N8Y2 350 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 TERB1Q8NA31 727 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 RNF214Q8ND24 703 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 USP33Q8TEY7 942 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 BAP1Q92560 729 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 AZIN2Q96A70 460 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 SLC39A13Q96H72 371 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 PCDHB18PQ96TA0 734 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 FAM126AQ9BYI3 521 aaPredicted RBP16.56■□□□□ 0.24
LIME1-209ENST00000494776 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.56■□□□□ 0.24
LIME1-209ENST00000494776 ZSCAN32Q9NX65 697 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 RRN3Q9NYV6 651 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 STOML2Q9UJZ1 356 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 STAP1Q9ULZ2 295 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 R4GN57 208 aa16.56■□□□□ 0.24
LIME1-209ENST00000494776 MYOFQ9NZM1 2061 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 A0A0A0MRY4 1105 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 M0QYT0 321 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 ABCB4P21439 1286 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 MMP8P22894 467 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 CCR1P32246 355 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 MATKP42679 507 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 SULT1E1P49888 294 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 CLEC16AQ2KHT3 1053 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 EMC10Q5UCC4 262 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 HEATR6Q6AI08 1181 aaKnown RBP16.55■□□□□ 0.24
LIME1-209ENST00000494776 RFWD3Q6PCD5 774 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 SND1Q7KZF4 910 aaKnown RBP eCLIP16.55■□□□□ 0.24
LIME1-209ENST00000494776 IRF2BP2Q7Z5L9 587 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 PHLDB2Q86SQ0 1253 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 PHTF2Q8N3S3 785 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 CCDC33Q8N5R6 958 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 PHOX2BQ99453 314 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 C11orf70Q9BRQ4 267 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 EDEM3Q9BZQ6 932 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 C2orf42Q9NWW7 574 aa16.55■□□□□ 0.24
LIME1-209ENST00000494776 CBFA2T2O43439 604 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 PAPSS2O95340 614 aaPredicted RBP16.54■□□□□ 0.24
LIME1-209ENST00000494776 KLF8O95600 359 aaPredicted RBP16.54■□□□□ 0.24
LIME1-209ENST00000494776 IGLV3-25P01717 112 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
LIME1-209ENST00000494776 NBL1P41271 181 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 DMC1Q14565 340 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 FIGNQ5HY92 759 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 SYT13Q7L8C5 426 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 CCDC117Q8IWD4 279 aaPredicted RBP16.54■□□□□ 0.24
LIME1-209ENST00000494776 ALLCQ8N6M5 410 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 ZNF513Q8N8E2 541 aaPredicted RBP16.54■□□□□ 0.24
LIME1-209ENST00000494776 CPLX3Q8WVH0 158 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 BTN2A3PQ96KV6 586 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 SLC2A11Q9BYW1 496 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 METTL5Q9NRN9 209 aaKnown RBP16.54■□□□□ 0.24
LIME1-209ENST00000494776 ADAM22Q9P0K1 906 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 STIM2Q9P246 746 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 PCDHGA2Q9Y5H1 932 aa16.54■□□□□ 0.24
LIME1-209ENST00000494776 K7ESF4 209 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 TBL1XO60907 577 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 CALB1P05937 261 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 CISD3P0C7P0 127 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 SLC6A4P31645 630 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 CENPCQ03188 943 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 KLHL30Q0D2K2 578 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 HSF5Q4G112 596 aaPredicted RBP16.53■□□□□ 0.24
LIME1-209ENST00000494776 FAM133BQ5BKY9 247 aaKnown RBP16.53■□□□□ 0.24
LIME1-209ENST00000494776 EOGTQ5NDL2 527 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 PIK3R6Q5UE93 754 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 NADSYN1Q6IA69 706 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 SDE2Q6IQ49 451 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 TRMT11Q7Z4G4 463 aaKnown RBP16.53■□□□□ 0.24
LIME1-209ENST00000494776 CHSY1Q86X52 802 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 TXNDC5Q8NBS9 432 aaKnown RBP16.53■□□□□ 0.24
LIME1-209ENST00000494776 HJURPQ8NCD3 748 aaPredicted RBP16.53■□□□□ 0.24
LIME1-209ENST00000494776 KCNV2Q8TDN2 545 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 IQCDQ96DY2 449 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 HHIPQ96QV1 700 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 IRX2Q9BZI1 471 aaPredicted RBP16.53■□□□□ 0.24
LIME1-209ENST00000494776 XPO4Q9C0E2 1151 aaKnown RBP16.53■□□□□ 0.24
LIME1-209ENST00000494776 TTYH3Q9C0H2 523 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 NUCKS1Q9H1E3 243 aaKnown RBP16.53■□□□□ 0.24
LIME1-209ENST00000494776 HAUS4Q9H6D7 363 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 ZDHHC4Q9NPG8 344 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 POLR3BQ9NW08 1133 aaPredicted RBP16.53■□□□□ 0.24
LIME1-209ENST00000494776 AIPL1Q9NZN9 384 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 FBXO10Q9UK96 956 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 MMP17Q9ULZ9 603 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 SLC27A6Q9Y2P4 619 aa16.53■□□□□ 0.24
LIME1-209ENST00000494776 CACNA1IQ9P0X4 2223 aa16.52■□□□□ 0.24
LIME1-209ENST00000494776 A0A1W2PQJ5 194 aa16.52■□□□□ 0.24
LIME1-209ENST00000494776 ANTXRLA6NF34 631 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms