RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 EVLQ9UI08 416 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-208ENST00000494728 PCDHB4Q9Y5E5 795 aa12.17□□□□□ -0.46
VTI1A-208ENST00000494728 KCNJ18B7U540 433 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 MAP3K13O43283 966 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 PAEPP09466 180 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 ENGP17813 658 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 HLA-FP30511 346 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 CHKAP35790 457 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 MAPK8P45983 427 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 NOVA1P51513 510 aaKnown RBP12.16□□□□□ -0.46
VTI1A-208ENST00000494728 COPAP53621 1224 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 SLC8A3P57103 927 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
VTI1A-208ENST00000494728 STIM1Q13586 685 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 ZNF234Q14588 700 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 ANKS1BQ7Z6G8 1248 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 SIX6OS1Q8N1H7 587 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 DDX1Q92499 740 aaKnown RBP12.16□□□□□ -0.46
VTI1A-208ENST00000494728 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
VTI1A-208ENST00000494728 DNAI2Q9GZS0 605 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 ACP6Q9NPH0 428 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 THAP10Q9P2Z0 257 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-208ENST00000494728 CYTH4Q9UIA0 394 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 STRIP2Q9ULQ0 834 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 ZNF510Q9Y2H8 683 aa12.16□□□□□ -0.46
VTI1A-208ENST00000494728 TOP3BO95985 862 aaKnown RBP12.15□□□□□ -0.46
VTI1A-208ENST00000494728 IGLV3-27P01718 113 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 FYNP06241 537 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 HLA-EP13747 358 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 SLC6A4P31645 630 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 MARSP56192 900 aaKnown RBP12.15□□□□□ -0.46
VTI1A-208ENST00000494728 KCNH2Q12809 1159 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 PAK1Q13153 545 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 FAM133BQ5BKY9 247 aaKnown RBP12.15□□□□□ -0.46
VTI1A-208ENST00000494728 SH3PXD2AQ5TCZ1 1133 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 NADSYN1Q6IA69 706 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 MSANTD2Q6P1R3 559 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 RFWD3Q6PCD5 774 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 GJB7Q6PEY0 223 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 SLC23A3Q6PIS1 610 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 FOXR2Q6PJQ5 311 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 KIAA1324Q6UXG2 1013 aaKnown RBP12.15□□□□□ -0.46
VTI1A-208ENST00000494728 NUDT18Q6ZVK8 323 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 SCML4Q8N228 414 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 ZNF366Q8N895 744 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 DDI1Q8WTU0 396 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 HSPA12BQ96MM6 686 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 PRICKLE1Q96MT3 831 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-208ENST00000494728 INTS2Q9H0H0 1204 aaKnown RBP12.15□□□□□ -0.46
VTI1A-208ENST00000494728 CAPN10Q9HC96 672 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 CNGB3Q9NQW8 809 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 TJP2Q9UDY2 1190 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 HOOK1Q9UJC3 728 aaKnown RBP12.15□□□□□ -0.46
VTI1A-208ENST00000494728 STOML2Q9UJZ1 356 aa12.15□□□□□ -0.46
VTI1A-208ENST00000494728 HBS1LQ9Y450 684 aaKnown RBP12.15□□□□□ -0.46
VTI1A-208ENST00000494728 DOCK9Q9BZ29 2069 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 FAM208BQ5VWN6 2430 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 GOLGA6L7A0A1B0GV03 622 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 AP5Z1O43299 807 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 KRT37O76014 449 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 CFIP05156 583 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 GCNT1Q02742 428 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 ZNF33AQ06730 810 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 ZNF252P-AS1Q0IIN9 211 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 CNGA2Q16280 664 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 PTPRNQ16849 979 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 UAP1L1Q3KQV9 507 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 SPDYCQ5MJ68 293 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 DENND1BQ6P3S1 775 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 TRIML1Q8N9V2 468 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 DEFB124Q8NES8 71 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 RNF139Q8WU17 664 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 CYB5D2Q8WUJ1 264 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 SRRTQ9BXP5 876 aaKnown RBP12.14□□□□□ -0.47
VTI1A-208ENST00000494728 GTPBP4Q9BZE4 634 aaKnown RBP12.14□□□□□ -0.47
VTI1A-208ENST00000494728 CIPCQ9C0C6 399 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 MIS12Q9H081 205 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 ABCC13Q9NSE7 274 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 OLA1Q9NTK5 396 aaKnown RBP12.14□□□□□ -0.47
VTI1A-208ENST00000494728 ELOVL2Q9NXB9 296 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 USP36Q9P275 1121 aaKnown RBP12.14□□□□□ -0.47
VTI1A-208ENST00000494728 AJAP1Q9UKB5 411 aaPredicted RBP12.14□□□□□ -0.47
VTI1A-208ENST00000494728 WASF3Q9UPY6 502 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 SLCO1B1Q9Y6L6 691 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 LOC400499M0QZD8 3231 aa12.14□□□□□ -0.47
VTI1A-208ENST00000494728 BICDL2A1A5D9 508 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 BECN2A8MW95 431 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 P4HA2O15460 535 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 ZNF217O75362 1048 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 AFPP02771 609 aaKnown RBP12.13□□□□□ -0.47
VTI1A-208ENST00000494728 LTFP02788 710 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 CYBBP04839 570 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 NCAM1P13591 858 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 SPINK2P20155 84 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 MAOBP27338 520 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 CD70P32970 193 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 GPD2P43304 727 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 RPL34P49207 117 aaKnown RBP12.13□□□□□ -0.47
VTI1A-208ENST00000494728 HARS2P49590 506 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms