RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	SLX1A	Q9BQ83	275 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	TRIM6	Q9C030	488 aa	Predicted RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	FOXP1	Q9H334	677 aa	Predicted RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	TMOD4	Q9NZQ9	345 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	CWC15	Q9P013	229 aa	Known RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	POLG2	Q9UHN1	485 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	OGDHL	Q9ULD0	1010 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	ASAP1	Q9ULH1	1129 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	SUFU	Q9UMX1	484 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	ITM2B	Q9Y287	266 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	SLC45A1	Q9Y2W3	748 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZMYM2	Q9UBW7	1377 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	LY6G6E	A0A0G2JKS1	128 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	RAB27B	O00194	218 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	TLR2	O60603	784 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	SNX2	O60749	519 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	ATF7	P17544	494 aa	Predicted RBP	5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	ACVR2A	P27037	513 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	TKT	P29401	623 aa	Known RBP	5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	RPS13	P62277	151 aa	Known RBP	5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	HTRA4	P83105	476 aa	Predicted RBP	5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	FMO1	Q01740	532 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	RAPGEF1	Q13905	1077 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	TAF11	Q15544	211 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	ST3GAL2	Q16842	350 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	CCSAP	Q6IQ19	270 aa	Predicted RBP	5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	SAMD14	Q8IZD0	417 aa	Predicted RBP	5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	MYOCD	Q8IZQ8	938 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	ERP27	Q96DN0	273 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	VCPIP1	Q96JH7	1222 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	C8orf48	Q96LL4	319 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	HIST1H2AA	Q96QV6	131 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	MPHOSPH6	Q99547	160 aa	Known RBP	5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZCWPW1	Q9H0M4	648 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	VEZT	Q9HBM0	779 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZNF287	Q9HBT7	754 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	TRPV5	Q9NQA5	729 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	POT1	Q9NUX5	634 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	TMEM184C	Q9NVA4	438 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	RGS17	Q9UGC6	210 aa	Predicted RBP	5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	STEAP1	Q9UHE8	339 aa		5.16	□□□□□ -1.58
CCDC66-222	ENST00000494672	RNASEH2A	O75792	299 aa	Known RBP	5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	RPN1	P04843	607 aa	Known RBP	5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	PARP1	P09874	1014 aa	Known RBP	5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	RPS16	P62249	146 aa	Known RBP	5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	IRX1	P78414	480 aa	Predicted RBP	5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	TRAF1	Q13077	416 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	MFSD13A	Q14CX5	517 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	PFKFB3	Q16875	520 aa	Predicted RBP	5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	TRIM71	Q2Q1W2	868 aa	Known RBP	5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	CCDC158	Q5M9N0	1113 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	ODR4	Q5SWX8	454 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	RNF220	Q5VTB9	566 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	MZT2A	Q6P582	158 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	CCDC91	Q7Z6B0	441 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	TRIM74	Q86UV6	250 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	TRIM73	Q86UV7	250 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	MORC1	Q86VD1	984 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	BRSK2	Q8IWQ3	736 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	ARL6IP6	Q8N6S5	226 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	PNPLA1	Q8N8W4	532 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	FAM71D	Q8N9W8	422 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	WDYHV1	Q96HA8	205 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	HIC2	Q96JB3	615 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	CHST8	Q9H2A9	424 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	AS3MT	Q9HBK9	375 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	DKK4	Q9UBT3	224 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	ITGB1BP2	Q9UKP3	347 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	NINL	Q9Y2I6	1382 aa		5.15	□□□□□ -1.59
CCDC66-222	ENST00000494672	PRDM2	Q13029	1718 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	FAM25E	A8MYX2	175 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	DYNC1I1	O14576	645 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	PLIN1	O60240	522 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	KIN	O60870	393 aa	Known RBP	5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	CAND2	O75155	1236 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	E2F6	O75461	281 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	KIAA0754	O94854	1291 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	TXN	P10599	105 aa	Known RBP	5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	CTSA	P10619	480 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	MYF5	P13349	255 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	BTF3	P20290	206 aa	Known RBP	5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	ADRA1D	P25100	572 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	HOXD10	P28358	340 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	TACR3	P29371	465 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	MCM5	P33992	734 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	ME1	P48163	572 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	HSF1	Q00613	529 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	SEC23B	Q15437	767 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	DNAJC21	Q5F1R6	531 aa	Known RBP	5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	ANKRD45	Q5TZF3	282 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	C11orf44	Q8N8P7	122 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	LRTOMT	Q8WZ04	291 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	FRAT1	Q92837	279 aa	Predicted RBP	5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	EDC3	Q96F86	508 aa	Known RBP	5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	APIP	Q96GX9	242 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	USP29	Q9HBJ7	922 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	DCAF16	Q9NXF7	216 aa		5.14	□□□□□ -1.59
CCDC66-222	ENST00000494672	TRMT1	Q9NXH9	659 aa	Known RBP	5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms