RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 PCMTD2Q9NV79 361 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 PCDHA11Q9Y5I1 949 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 CCDC195A0A1B0GUA6 201 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 FAM237BA0A1B0GVD1 139 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 M0QYT0 321 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 MFSD11O43934 449 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 EPHB2P29323 1055 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 SERPINB3P29508 390 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 SCNN1AP37088 669 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 MAGEA3P43357 314 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 IRX4P78413 519 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 MRPS5P82675 430 aaKnown RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 SEMA5AQ13591 1074 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 PCBP1Q15365 356 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 SYPL2Q5VXT5 272 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 WSCD1Q658N2 575 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 TWF2Q6IBS0 349 aaKnown RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 NDUFAF2Q8N183 169 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 ZNF395Q9H8N7 513 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 LRRC4Q9HBW1 653 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 XAB2Q9HCS7 855 aaKnown RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 ARHGEF4Q9NR80 690 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 FBXO6Q9NRD1 293 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-209ENST00000494623 FLRT1Q9NZU1 646 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 MCM8Q9UJA3 840 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 USP3Q9Y6I4 520 aa11.57□□□□□ -0.56
CHMP3-209ENST00000494623 A0A0A0MRY4 1105 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 HMX2A2RU54 273 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 FAM159BA6NKW6 160 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 GSTA2P09210 222 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 PTPN1P18031 435 aaKnown RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 MAP3K7CLP57077 242 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 TMPRSS15P98073 1019 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 FAM110CQ1W6H9 321 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 BZW1Q7L1Q6 419 aaKnown RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 SMG8Q8ND04 991 aaKnown RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 GIMAP7Q8NHV1 300 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 P2RY11Q96G91 374 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 PRR11Q96HE9 360 aaPredicted RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 OXNAD1Q96HP4 312 aaPredicted RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 ZFP42Q96MM3 310 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 SPATA13Q96N96 652 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 HNRNPABQ99729 332 aaKnown RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 SLC17A6Q9P2U8 582 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 MTO1Q9Y2Z2 717 aaKnown RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 TOMM70O94826 608 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 TOP3BO95985 862 aaKnown RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 DLDP09622 509 aaKnown RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 RARBP10826 455 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 MYL2P10916 166 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 CTC1Q2NKJ3 1217 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 MDH1BQ5I0G3 518 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 HFE2Q6ZVN8 426 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 PAQR9Q6ZVX9 377 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 NUDCD3Q8IVD9 361 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 TP53INP2Q8IXH6 220 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 ADAM32Q8TC27 787 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 RNF139Q8WU17 664 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 E2F7Q96AV8 911 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 TACO1Q9BSH4 297 aaKnown RBP11.56□□□□□ -0.56
CHMP3-209ENST00000494623 ARL8BQ9NVJ2 186 aa11.56□□□□□ -0.56
CHMP3-209ENST00000494623 IQCA1LA6NCM1 817 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 SDR42E2A6NKP2 422 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 HACD1B0YJ81 288 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 RNF103O00237 685 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 DIAPH2O60879 1101 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 HAUS5O94927 633 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 TGDSO95455 350 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 KITP10721 976 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 NPR3P17342 541 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 WARSP23381 471 aaKnown RBP11.55□□□□□ -0.56
CHMP3-209ENST00000494623 MGAT1P26572 445 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 PTPN4P29074 926 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 NOS2P35228 1153 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 ADAM17P78536 824 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 DEUP1Q05D60 604 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 CHI3L2Q15782 390 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 XKR4Q5GH76 650 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 SIX6OS1Q8N1H7 587 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 GPATCH11Q8N954 259 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 FAM13CQ8NE31 585 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 OLFM3Q96PB7 478 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 SAR1AQ9NR31 198 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 NOP53Q9NZM5 478 aaKnown RBP11.55□□□□□ -0.56
CHMP3-209ENST00000494623 GTF2IRD1Q9UHL9 959 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 TIMM13Q9Y5L4 95 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-209ENST00000494623 MEIS3P2A8K0S8 358 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 H3BRJ5 948 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 I3L4J1 428 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 CAPN9O14815 690 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 STK10O94804 968 aaKnown RBP11.55□□□□□ -0.56
CHMP3-209ENST00000494623 FDFT1P37268 417 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 TKTL1P51854 596 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 CRYBB1P53674 252 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-209ENST00000494623 CDK16Q00536 496 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 BST1Q10588 318 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 CCL14Q16627 93 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 OTUD1Q5VV17 481 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-209ENST00000494623 KIAA0319Q5VV43 1072 aa11.55□□□□□ -0.56
CHMP3-209ENST00000494623 SPRYD7Q5W111 196 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms