RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 MAGEA6P43360 314 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 GPX6P59796 221 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 YWHAGP61981 247 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATG4B-225ENST00000494465 STAT4Q14765 748 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 NR2E3Q9Y5X4 410 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 C5orf60A6NFR6 353 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 ERICH4A6NGS2 130 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 A6NNZ2 444 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 GCAP28676 217 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 CYP2C18P33260 490 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 HCAR3P49019 387 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 GPR15P49685 360 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 CBLBQ13191 982 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 NFE2Q16621 373 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-225ENST00000494465 TUBB8Q3ZCM7 444 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 CTXN3Q4LDR2 81 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 SYCP2LQ5T4T6 812 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 TMEM173Q86WV6 379 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-225ENST00000494465 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 ANKMY2Q8IV38 441 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 SCN4BQ8IWT1 228 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 STKLD1Q8NE28 680 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 LGMNQ99538 433 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 PPP1R12CQ9BZL4 782 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 CRISPLD2Q9H0B8 497 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 TKTL2Q9H0I9 626 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 WDCPQ9H6R7 721 aa17.09■□□□□ 0.33
ATG4B-225ENST00000494465 MKI67P46013 3256 aaKnown RBP17.08■□□□□ 0.33
ATG4B-225ENST00000494465 A0A087WUV0 522 aaPredicted RBP17.08■□□□□ 0.33
ATG4B-225ENST00000494465 HACD1B0YJ81 288 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 GALTP07902 379 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 PBX3P40426 434 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 MMP13P45452 471 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 PPARDQ03181 441 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 IFRD2Q12894 506 aaPredicted RBP17.08■□□□□ 0.33
ATG4B-225ENST00000494465 MTM1Q13496 603 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 PRKD1Q15139 912 aaPredicted RBP17.08■□□□□ 0.33
ATG4B-225ENST00000494465 TRIM60Q495X7 471 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 FAXCQ5TGI0 409 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 VSTM1Q6UX27 236 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 TP53INP2Q8IXH6 220 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 TFB1MQ8WVM0 346 aaKnown RBP17.08■□□□□ 0.33
ATG4B-225ENST00000494465 VWCEQ96DN2 955 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 TRIM62Q9BVG3 475 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 NMUR1Q9HB89 426 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 LGALS13Q9UHV8 139 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 SNX10Q9Y5X0 201 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 GREB1Q4ZG55 1949 aa17.08■□□□□ 0.33
ATG4B-225ENST00000494465 MYO18AQ92614 2054 aaKnown RBP17.08■□□□□ 0.32
ATG4B-225ENST00000494465 HOXA2O43364 376 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 METTL18O95568 372 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 ERCC2P18074 760 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 TLE2Q04725 743 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 DDR2Q16832 855 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 ARL13BQ3SXY8 428 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 SDHAF4Q5VUM1 108 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 FUT10Q6P4F1 479 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 RSPO2Q6UXX9 243 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-225ENST00000494465 EXOC3L1Q86VI1 746 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 CYP4X1Q8N118 509 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 TTC9BQ8N6N2 239 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 C8orf48Q96LL4 319 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 PGLYRP2Q96PD5 576 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 ETNK1Q9HBU6 452 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 ABCC13Q9NSE7 274 aa17.08■□□□□ 0.32
ATG4B-225ENST00000494465 TBKBP1A7MCY6 615 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 NT5C1B-RDH14C9J2C7 533 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 IRAK2O43187 625 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 TBC1D4O60343 1298 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 LSP1P33241 339 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 CCDC38Q502W7 563 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 HEATR6Q6AI08 1181 aaKnown RBP17.07■□□□□ 0.32
ATG4B-225ENST00000494465 BZW1Q7L1Q6 419 aaKnown RBP17.07■□□□□ 0.32
ATG4B-225ENST00000494465 PDIK1LQ8N165 341 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 AGGF1Q8N302 714 aaeCLIP17.07■□□□□ 0.32
ATG4B-225ENST00000494465 ATAD1Q8NBU5 361 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 BCL7CQ8WUZ0 217 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-225ENST00000494465 HTR3CQ8WXA8 447 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 TOX2Q96NM4 488 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 TMEM175Q9BSA9 504 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 STMN4Q9H169 189 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-225ENST00000494465 OSER1Q9NX31 292 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 NUP205Q92621 2012 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 COL4A6Q14031 1691 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 OR6C75A6NL08 312 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 MAGEA11P43364 429 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 TPI1P60174 286 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 RTP2Q5QGT7 225 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 ZNF280DQ6N043 979 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 C4orf22Q6V702 233 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 DEFB128Q7Z7B8 93 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 IGDCC3Q8IVU1 814 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 FBXO36Q8NEA4 188 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 PYROXD1Q8WU10 500 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 BEGAINQ9BUH8 593 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 MRPL9Q9BYD2 267 aaKnown RBP17.07■□□□□ 0.32
ATG4B-225ENST00000494465 KLC2Q9H0B6 622 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 SMOC2Q9H3U7 446 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 ARHGEF38Q9NXL2 777 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms