RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CYBBP04839 570 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 TPM2P07951 284 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 CISD3P0C7P0 127 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 HNRNPLP14866 589 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERCC3-209ENST00000494464 APBA1Q02410 837 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 LMNB2Q03252 620 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 RING1Q06587 406 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 NNTQ13423 1086 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 ARHGAP44Q17R89 818 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 EMC10Q5UCC4 262 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 ANO7Q6IWH7 933 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 DENND1BQ6P3S1 775 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 TOGARAM2Q6ZUX3 1019 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 BEND5Q7L4P6 421 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 C11orf74Q86VG3 221 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 MDGA1Q8NFP4 955 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 TRIM62Q9BVG3 475 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 POLMQ9NP87 494 aaPredicted RBP13.75□□□□□ -0.21
ERCC3-209ENST00000494464 PARD6AQ9NPB6 346 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 SFMBT1Q9UHJ3 866 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 HCN2Q9UL51 889 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 PCDHGC3Q9UN70 934 aa13.75□□□□□ -0.21
ERCC3-209ENST00000494464 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.75□□□□□ -0.211e-6■■■■□ 21.3
ERCC3-209ENST00000494464 PRRT4C9JH25 899 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 GFRA2O00451 464 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 MSI1O43347 362 aaKnown RBP13.74□□□□□ -0.21
ERCC3-209ENST00000494464 EPN2O95208 641 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 PDCLQ13371 301 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 NUGGCQ68CJ6 796 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 DPY19L2P1Q6NXN4 242 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 KBTBD6Q86V97 674 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 TC2NQ8N9U0 490 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 OLIG1Q8TAK6 271 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 BHMTQ93088 406 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 SLC2A11Q9BYW1 496 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 IRX2Q9BZI1 471 aaPredicted RBP13.74□□□□□ -0.21
ERCC3-209ENST00000494464 MIS12Q9H081 205 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 ACP6Q9NPH0 428 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 ST7Q9NRC1 585 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 PLK2Q9NYY3 685 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 CYTH4Q9UIA0 394 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 DNAJC12Q9UKB3 198 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 AJAP1Q9UKB5 411 aaPredicted RBP13.74□□□□□ -0.21
ERCC3-209ENST00000494464 USP18Q9UMW8 372 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 RALGAPA1Q6GYQ0 2036 aa13.74□□□□□ -0.21
ERCC3-209ENST00000494464 MYO18AQ92614 2054 aaKnown RBP13.74□□□□□ -0.21
ERCC3-209ENST00000494464 MUC22E2RYF6 1773 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-209ENST00000494464 AKR1B15C9JRZ8 316 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-209ENST00000494464 E5RJQ4 531 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 PAPSS1O43252 624 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-209ENST00000494464 FOXD2O60548 495 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-209ENST00000494464 FYNP06241 537 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 HOXB2P14652 356 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 NTSR1P30989 418 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 ID4P47928 161 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 PTK2Q05397 1052 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 SPEM2Q0P670 501 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 CSRP2Q16527 193 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 PLK5Q496M5 336 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 MPPE1Q53F39 396 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 USP39Q53GS9 565 aaKnown RBP13.73□□□□□ -0.21
ERCC3-209ENST00000494464 EGFLAMQ63HQ2 1017 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 ANKS1BQ7Z6G8 1248 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 TMEM110Q86TL2 294 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 TMEM139Q8IV31 216 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 CNGA4Q8IV77 575 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 UNC45BQ8IWX7 931 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 DQX1Q8TE96 717 aaKnown RBP13.73□□□□□ -0.21
ERCC3-209ENST00000494464 SERPINB11Q96P15 392 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 PANX2Q96RD6 677 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 GABRG3Q99928 467 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 TPSD1Q9BZJ3 242 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 VPS16Q9H269 839 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 LHX5Q9H2C1 402 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 ZDHHC4Q9NPG8 344 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 PCDHGA5Q9Y5G8 931 aa13.73□□□□□ -0.21
ERCC3-209ENST00000494464 PRR5-ARHGAP8B1AHC4 643 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 NPC1O15118 1278 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 ARHGAP6O43182 974 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 MFAP3LO75121 409 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 TPM1P09493 284 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 NCAM1P13591 858 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 FECHP22830 423 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 HOXD9P28356 352 aaPredicted RBP13.72□□□□□ -0.21
ERCC3-209ENST00000494464 USP8P40818 1118 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 ARHGAP8P85298 464 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 KCNMA1Q12791 1236 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 EIF4HQ15056 248 aaKnown RBP13.72□□□□□ -0.21
ERCC3-209ENST00000494464 ELF2Q15723 593 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 ADGRF1Q5T601 910 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 RNF43Q68DV7 783 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 SCUBE3Q8IX30 993 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 FAM71AQ8IYT1 594 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 CHPFQ8IZ52 775 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 C17orf53Q8N3J3 647 aaPredicted RBP13.72□□□□□ -0.21
ERCC3-209ENST00000494464 DDI1Q8WTU0 396 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 AZIN2Q96A70 460 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 FAM149B1Q96BN6 582 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 RMDN1Q96DB5 314 aa13.72□□□□□ -0.21
ERCC3-209ENST00000494464 IQCDQ96DY2 449 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms