RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 HOXC11O43248 304 aaPredicted RBP12.96□□□□□ -0.34
TRA2A-209ENST00000494255 GJB6O95452 261 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 GPD1P21695 349 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 CLCN5P51795 746 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 ATP11AP98196 1134 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 PPP2R5DQ14738 602 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 SLC18A3Q16572 532 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.96□□□□□ -0.34
TRA2A-209ENST00000494255 FAM217AQ8IXS0 508 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 TC2NQ8N9U0 490 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 PJA1Q8NG27 643 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 JOSD2Q8TAC2 188 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 RXFP2Q8WXD0 754 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 CD101Q93033 1021 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 NT5C3BQ969T7 300 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 PGAP3Q96FM1 320 aaPredicted RBP12.96□□□□□ -0.34
TRA2A-209ENST00000494255 MCEEQ96PE7 176 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 P2RY13Q9BPV8 354 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 OSBPL6Q9BZF3 934 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 FOXQ1Q9C009 403 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 CNOT8Q9UFF9 292 aaKnown RBP12.96□□□□□ -0.34
TRA2A-209ENST00000494255 SCINQ9Y6U3 715 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 MYOFQ9NZM1 2061 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 COL4A3Q01955 1670 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 TCRBV5S1A1TA0A578 114 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 TRDMT1O14717 391 aaKnown RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 ATMINO43313 823 aaPredicted RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 TYRP14679 529 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 AOC1P19801 751 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 TARSP26639 723 aaKnown RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 RFC1P35251 1148 aaPredicted RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 PTPN9P43378 593 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 GRSF1Q12849 480 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 MAMLD1Q13495 774 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 PREPLQ4J6C6 727 aaPredicted RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 BRMS1LQ5PSV4 323 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 CWF19L1Q69YN2 538 aaKnown RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 PLEKHA7Q6IQ23 1121 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 TRNP1Q6NT89 227 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 TXNDC11Q6PKC3 985 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 DNAAF5Q86Y56 855 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 XPO6Q96QU8 1125 aaKnown RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 CHP1Q99653 195 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 WDCPQ9H6R7 721 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 NHEJ1Q9H9Q4 299 aaPredicted RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 MRPL47Q9HD33 250 aaKnown RBP12.95□□□□□ -0.34
TRA2A-209ENST00000494255 PIGVQ9NUD9 493 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 MARK1Q9P0L2 795 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 MYO1AQ9UBC5 1043 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 STOML2Q9UJZ1 356 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 MIA3Q5JRA6 1907 aa12.95□□□□□ -0.34
TRA2A-209ENST00000494255 TYW5A2RUC4 315 aaKnown RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 GOLGA6L3A6NEY3 463 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 SHISA7A6NL88 538 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 KCNU1A8MYU2 1149 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 VCANP13611 3396 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 TFE3P19532 575 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 RDXP35241 583 aaKnown RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 EIF2DP41214 584 aaKnown RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 GALK1P51570 392 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 GFPT1Q06210 699 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 EIF4EBP2Q13542 120 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 LRRC32Q14392 662 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 CDO1Q16878 200 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 GAB4Q2WGN9 574 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 MPPE1Q53F39 396 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 OTUD1Q5VV17 481 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 CHSY1Q86X52 802 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 DDI1Q8WTU0 396 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 BHMTQ93088 406 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 CHFRQ96EP1 664 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 TMA16Q96EY4 203 aaKnown RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 PANX2Q96RD6 677 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 LRFN3Q9BTN0 628 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 IRX2Q9BZI1 471 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 IMPACTQ9P2X3 320 aa12.94□□□□□ -0.34
TRA2A-209ENST00000494255 MTF2Q9Y483 593 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-209ENST00000494255 CACNG3O60359 315 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 TSPAN3O60637 253 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 DRD1P21728 446 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 OPRD1P41143 372 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 CXCR3P49682 368 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 ZNF143P52747 638 aaPredicted RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 RPL7AP62424 266 aaKnown RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 C15orf59Q2T9L4 293 aaPredicted RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 ASTE1Q2TB18 679 aaPredicted RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 CCDC14Q49A88 953 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 TMEM196Q5HYL7 178 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 DGKKQ5KSL6 1271 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 RFWD3Q6PCD5 774 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 STRADAQ7RTN6 431 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 CCDC105Q8IYK2 499 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 NAT16Q8N8M0 369 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 SPC24Q8NBT2 197 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 PNKPQ96T60 521 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 CNPY3Q9BT09 278 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms