RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ABL1P00519 1130 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 RPN1P04843 607 aaKnown RBP8.56□□□□□ -1.04
HDAC6-234ENST00000493923 RETP07949 1114 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 GSTA1P08263 222 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 TCF3P15923 654 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 TNFRSF8P28908 595 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 HOXA6P31267 233 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 GGCXP38435 758 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 ASPAP45381 313 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 IFNAR2P48551 515 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 NDST1P52848 882 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 NRLP54845 237 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 SEC13P55735 322 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 SNRPFP62306 86 aaKnown RBP8.56□□□□□ -1.04
HDAC6-234ENST00000493923 NOP14P78316 857 aaKnown RBP8.56□□□□□ -1.04
HDAC6-234ENST00000493923 SLC7A9P82251 487 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 GRSF1Q12849 480 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC6-234ENST00000493923 PUM1Q14671 1186 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC6-234ENST00000493923 KCNB1Q14721 858 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 SF3A2Q15428 464 aaKnown RBP8.56□□□□□ -1.04
HDAC6-234ENST00000493923 DPCR1Q3MIW9 517 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 ZACNQ401N2 412 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 ZNF569Q5MCW4 686 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 LAIR1Q6GTX8 287 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 RHBDF2Q6PJF5 856 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 ERMP1Q7Z2K6 904 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 TMTC1Q8IUR5 882 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 CNGA4Q8IV77 575 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 SYNPOQ8N3V7 929 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 CPA6Q8N4T0 437 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 WHAMMQ8TF30 809 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 LZICQ8WZA0 190 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 CD101Q93033 1021 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 EEF2KMTQ96G04 330 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 CENPHQ9H3R5 247 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 EBF2Q9HAK2 575 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 FAM49BQ9NUQ9 324 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 OSER1Q9NX31 292 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 IL37Q9NZH6 218 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 NOP53Q9NZM5 478 aaKnown RBP8.56□□□□□ -1.04
HDAC6-234ENST00000493923 GMIPQ9P107 970 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 CFAP97Q9P2B7 532 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 ZMYM5Q9UJ78 669 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 HCN2Q9UL51 889 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 FRYQ5TBA9 3013 aa8.56□□□□□ -1.04
HDAC6-234ENST00000493923 ASCC3Q8N3C0 2202 aaKnown RBP8.56□□□□□ -1.04
HDAC6-234ENST00000493923 KMT2BQ9UMN6 2715 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-234ENST00000493923 HHLA1C9JL84 531 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 PDXKO00764 312 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 MDM4O15151 490 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 MGRN1O60291 552 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 GREM1O60565 184 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 AP1G2O75843 785 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 SMNDC1O75940 238 aaKnown RBP eCLIP8.55□□□□□ -1.04
HDAC6-234ENST00000493923 RHOBTB3O94955 611 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TBX18O95935 607 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ASS1P00966 412 aaKnown RBP8.55□□□□□ -1.04
HDAC6-234ENST00000493923 FAM163BP0C2L3 166 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ZDHHC11BP0C7U3 371 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 FECHP22830 423 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ANXA13P27216 316 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 YWHAQP27348 245 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ADORA2BP29275 332 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ATICP31939 592 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 SYKP43405 635 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 GCLMP48507 274 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 SLC5A3P53794 718 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TMED1Q13445 227 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 DMC1Q14565 340 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 DHCR24Q15392 516 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 MAPRE1Q15691 268 aaKnown RBP8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ZCWPW2Q504Y3 356 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ZNF667Q5HYK9 610 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 NAA35Q5VZE5 725 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TCEAL6Q6IPX3 200 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 C1orf228Q6PIY5 440 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 CEP68Q76N32 757 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 CACNA2D4Q7Z3S7 1137 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TRIM74Q86UV6 250 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TRIM73Q86UV7 250 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ADGRG2Q8IZP9 1017 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 PHTF2Q8N3S3 785 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 CCDC33Q8N5R6 958 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TC2NQ8N9U0 490 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 SLC2A14Q8TDB8 520 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TMC2Q8TDI7 906 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TAS1R2Q8TE23 839 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 USP33Q8TEY7 942 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ZNF473Q8WTR7 871 aaKnown RBP8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TMEM174Q8WUU8 243 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 SEMA4DQ92854 862 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ATP2A3Q93084 1043 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 TCEAL3Q969E4 200 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 FBXO32Q969P5 355 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 JAKMIP2Q96AA8 810 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 MED10Q9BTT4 135 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 SELENOOQ9BVL4 669 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ELOVL4Q9GZR5 314 aa8.55□□□□□ -1.04
HDAC6-234ENST00000493923 ARRDC1-AS1Q9H2J1 176 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms