RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PRRT4C9JH25 899 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 IRAK2O43187 625 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 ATP1A3P13637 1013 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 HOXD9P28356 352 aaPredicted RBP23.54■■□□□ 1.36
SNIP1-203ENST00000493916 TAF5Q15542 800 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 LAIR1Q6GTX8 287 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 TMEM92Q6UXU6 159 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 RASSF3Q86WH2 238 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 ZDHHC17Q8IUH5 632 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 PDCL3Q9H2J4 239 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 SYNCQ9H7C4 482 aa23.54■■□□□ 1.36
SNIP1-203ENST00000493916 ACSL4O60488 711 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 RPP40O75818 363 aaKnown RBP23.53■■□□□ 1.36
SNIP1-203ENST00000493916 HNRNPLP14866 589 aaKnown RBP eCLIP23.53■■□□□ 1.36
SNIP1-203ENST00000493916 SOX5P35711 763 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 FAM133BQ5BKY9 247 aaKnown RBP23.53■■□□□ 1.36
SNIP1-203ENST00000493916 TAF3Q5VWG9 929 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 EGFLAMQ63HQ2 1017 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 RNF43Q68DV7 783 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 PRR23BQ6ZRT6 265 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 SLC26A9Q7LBE3 791 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 ZNF677Q86XU0 584 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 ZNF397Q8NF99 534 aaPredicted RBP23.53■■□□□ 1.36
SNIP1-203ENST00000493916 NEK11Q8NG66 645 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 ADAM32Q8TC27 787 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 NCDNQ9UBB6 729 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 NOCTQ9UK39 431 aaKnown RBP23.53■■□□□ 1.36
SNIP1-203ENST00000493916 OTOGLQ3ZCN5 2332 aa23.53■■□□□ 1.36
SNIP1-203ENST00000493916 RIF1Q5UIP0 2472 aaKnown RBP23.52■■□□□ 1.36
SNIP1-203ENST00000493916 ALDH1A2O94788 518 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 GFPT2O94808 682 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 TRUB2O95900 331 aaKnown RBP23.52■■□□□ 1.36
SNIP1-203ENST00000493916 NTSR1P30989 418 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 GABRB2P47870 512 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 ZNF165P49910 485 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 SLC6A3Q01959 620 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 EIF4EBP2Q13542 120 aaPredicted RBP23.52■■□□□ 1.36
SNIP1-203ENST00000493916 MPP7Q5T2T1 576 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 OR6B2Q6IFH4 312 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 ANKS1BQ7Z6G8 1248 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 TMA16Q96EY4 203 aaKnown RBP23.52■■□□□ 1.36
SNIP1-203ENST00000493916 PCMTD1Q96MG8 357 aaPredicted RBP23.52■■□□□ 1.36
SNIP1-203ENST00000493916 SPAG5Q96R06 1193 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 DDX50Q9BQ39 737 aaKnown RBP23.52■■□□□ 1.36
SNIP1-203ENST00000493916 HINFPQ9BQA5 517 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 POLMQ9NP87 494 aaPredicted RBP23.52■■□□□ 1.36
SNIP1-203ENST00000493916 ZDHHC4Q9NPG8 344 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 NLRC4Q9NPP4 1024 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 CLEC4EQ9ULY5 219 aa23.52■■□□□ 1.36
SNIP1-203ENST00000493916 GVINP1Q7Z2Y8 2422 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 TSPAN3O60637 253 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 DAB1O75553 588 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 SCNN1AP37088 669 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 STAT1P42224 750 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 CDK17Q00537 523 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 GEN1Q17RS7 908 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 DCAF6Q58WW2 860 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 PIK3R6Q5UE93 754 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 NADSYN1Q6IA69 706 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 ANO7Q6IWH7 933 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 CEP68Q76N32 757 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 DEFB106AQ8N104 65 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 MDGA1Q8NFP4 955 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 GABRG3Q99928 467 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 GMEB2Q9UKD1 530 aa23.51■■□□□ 1.35
SNIP1-203ENST00000493916 FAM186AA6NE01 2351 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 APOEP02649 317 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 MMEP08473 750 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 SLC6A4P31645 630 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 SGSHP51688 502 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 NOMO3P69849 1222 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 PITX1P78337 314 aaPredicted RBP23.5■■□□□ 1.35
SNIP1-203ENST00000493916 CDR2Q01850 454 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 EIF4HQ15056 248 aaKnown RBP23.5■■□□□ 1.35
SNIP1-203ENST00000493916 CACNA2D4Q7Z3S7 1137 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 MSANTD4Q8NCY6 345 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 FAM204AQ9H8W3 233 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 GPR179Q6PRD1 2367 aa23.5■■□□□ 1.35
SNIP1-203ENST00000493916 EML5Q05BV3 1969 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 GOLGA6L7A0A1B0GV03 622 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 SYCE3A1L190 88 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 NPC1O15118 1278 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 GRAP2O75791 330 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 HOXB2P14652 356 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 IQCB1Q15051 598 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 E2F5Q15329 346 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 LPAL2Q16609 132 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 ZC3H12AQ5D1E8 599 aaKnown RBP23.49■■□□□ 1.35
SNIP1-203ENST00000493916 SDE2Q6IQ49 451 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 RFWD3Q6PCD5 774 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.49■■□□□ 1.35
SNIP1-203ENST00000493916 ERICH1Q86X53 443 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 CHPFQ8IZ52 775 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.49■■□□□ 1.35
SNIP1-203ENST00000493916 HJURPQ8NCD3 748 aaPredicted RBP23.49■■□□□ 1.35
SNIP1-203ENST00000493916 SLC20A1Q8WUM9 679 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 C18orf8Q96DM3 657 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 BTN2A3PQ96KV6 586 aa23.49■■□□□ 1.35
SNIP1-203ENST00000493916 PRICKLE1Q96MT3 831 aaPredicted RBP23.49■■□□□ 1.35
SNIP1-203ENST00000493916 ACOX2Q99424 681 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms