RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RASA2Q15283 850 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 DCAF6Q58WW2 860 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 AGMOQ6ZNB7 445 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 FAM131BQ86XD5 332 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 LRRN4Q8WUT4 740 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 ALG13Q9NP73 1137 aaKnown RBP14.25□□□□□ -0.13
VCP-207ENST00000493886 PSMC3IPQ9P2W1 217 aaPredicted RBP14.25□□□□□ -0.13
VCP-207ENST00000493886 PRKAG3Q9UGI9 489 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 GIT1Q9Y2X7 761 aa14.25□□□□□ -0.13
VCP-207ENST00000493886 ADAMTS4O75173 837 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 FAM200BP0CF97 657 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 MSH2P43246 934 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 NDUFV1P49821 464 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 SCNN1GP51170 649 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 YWHAZP63104 245 aaKnown RBP14.24□□□□□ -0.13
VCP-207ENST00000493886 SLC10A2Q12908 348 aaPredicted RBP14.24□□□□□ -0.13
VCP-207ENST00000493886 SLC1A5Q15758 541 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 PPP1R21Q6ZMI0 780 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 CDKL3Q8IVW4 592 aaPredicted RBP14.24□□□□□ -0.13
VCP-207ENST00000493886 SIX6OS1Q8N1H7 587 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 TMEM86AQ8N2M4 240 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 C3orf58Q8NDZ4 430 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 FBF1Q8TES7 1133 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 SYT15Q9BQS2 421 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 KRT82Q9NSB4 513 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 FETUBQ9UGM5 382 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 PHTF1Q9UMS5 762 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 CHMP2BQ9UQN3 213 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 TIMM13Q9Y5L4 95 aaPredicted RBP14.24□□□□□ -0.13
VCP-207ENST00000493886 TSHRP16473 764 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 THPOP40225 353 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 MAGEA10P43363 369 aaPredicted RBP14.24□□□□□ -0.13
VCP-207ENST00000493886 LHX1P48742 406 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 MAP3K7CLP57077 242 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 NKX3-2P78367 333 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 DSTYKQ6XUX3 929 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 PYROXD2Q8N2H3 581 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 ACSS3Q9H6R3 686 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 HAO1Q9UJM8 370 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 FZD10Q9ULW2 581 aa14.24□□□□□ -0.13
VCP-207ENST00000493886 ASMTLO95671 621 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 ASGR1P07306 291 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 NEFHP12036 1026 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 NOS2P35228 1153 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 ELK3P41970 407 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 NR2C2P49116 596 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 PITX1P78337 314 aaPredicted RBP14.23□□□□□ -0.13
VCP-207ENST00000493886 PRKCZQ05513 592 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 CACNB2Q08289 660 aaPredicted RBP14.23□□□□□ -0.13
VCP-207ENST00000493886 CRYMQ14894 314 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 KLHL38Q2WGJ6 581 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 FAXCQ5TGI0 409 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 OTUD1Q5VV17 481 aaPredicted RBP14.23□□□□□ -0.13
VCP-207ENST00000493886 C16orf87Q6PH81 154 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 IGDCC3Q8IVU1 814 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 TRIM42Q8IWZ5 723 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 LBHD1Q9BQE6 289 aaPredicted RBP14.23□□□□□ -0.13
VCP-207ENST00000493886 KLC2Q9H0B6 622 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 XPNPEP3Q9NQH7 507 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 SENP1Q9P0U3 644 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 CASTOR2A6NHX0 329 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 RPLP2P05387 115 aaKnown RBP14.23□□□□□ -0.13
VCP-207ENST00000493886 ATP2A2P16615 1042 aaKnown RBP14.23□□□□□ -0.13
VCP-207ENST00000493886 GOT1P17174 413 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 AMPD1P23109 780 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 ARL4AP40617 200 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 TKTL1P51854 596 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 SLC45A4Q5BKX6 768 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 MRPL10Q7Z7H8 261 aaKnown RBP14.23□□□□□ -0.13
VCP-207ENST00000493886 GBP7Q8N8V2 638 aaPredicted RBP14.23□□□□□ -0.13
VCP-207ENST00000493886 CCDC110Q8TBZ0 833 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 NT5C3BQ969T7 300 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 PLEKHG4BQ96PX9 1271 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 SMC6Q96SB8 1091 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 NPY6RQ99463 290 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 SLX1AQ9BQ83 275 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 ETNK2Q9NVF9 386 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 SUN2Q9UH99 717 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 ABT1Q9ULW3 272 aaKnown RBP14.23□□□□□ -0.13
VCP-207ENST00000493886 PADI3Q9ULW8 664 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 USP3Q9Y6I4 520 aa14.23□□□□□ -0.13
VCP-207ENST00000493886 MYBPHLA2RUH7 354 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 CBX6O95503 412 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 CD52P31358 61 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 KCNA10Q16322 511 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 NCBP2-AS2Q69YL0 99 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 FAM35AQ86V20 835 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 MAGEC3Q8TD91 643 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 PAFAH2Q99487 392 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 PAAF1Q9BRP4 392 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 STAP1Q9ULZ2 295 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 CHKBQ9Y259 395 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 TEX264Q9Y6I9 313 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 SYNJ2BP-COX16A0A087WUM0 186 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 MGEA5O60502 916 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 RPL9P32969 192 aaKnown RBP14.22□□□□□ -0.13
VCP-207ENST00000493886 RAB27AP51159 221 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 RABGGTBP53611 331 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 OVGP1Q12889 678 aa14.22□□□□□ -0.13
VCP-207ENST00000493886 KCNT2Q6UVM3 1135 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms