RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 IGLV3-27P01718 113 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 LAMP2P13473 410 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 SSR1P43307 286 aaKnown RBP12.91□□□□□ -0.34
SNX17-208ENST00000493711 HDAC4P56524 1084 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 ZNF252P-AS1Q0IIN9 211 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 SMAD2Q15796 467 aaKnown RBP12.91□□□□□ -0.34
SNX17-208ENST00000493711 CDO1Q16878 200 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 C15orf59Q2T9L4 293 aaPredicted RBP12.91□□□□□ -0.34
SNX17-208ENST00000493711 DMRTA1Q5VZB9 504 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 SCYL2Q6P3W7 929 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 SLFN11Q7Z7L1 901 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 ARID3BQ8IVW6 561 aaPredicted RBP12.91□□□□□ -0.34
SNX17-208ENST00000493711 RHOT1Q8IXI2 618 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 ZNF454Q8N9F8 522 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 LRRC57Q8N9N7 239 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 ADAM32Q8TC27 787 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 TEKT4Q8WW24 435 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 NXPE3Q969Y0 559 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 OTUB2Q96DC9 234 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 BTN2A3PQ96KV6 586 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 ASB16Q96NS5 453 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 HAPLN3Q96S86 360 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 CYP2S1Q96SQ9 504 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 PHF7Q9BWX1 381 aaPredicted RBP12.91□□□□□ -0.34
SNX17-208ENST00000493711 POMKQ9H5K3 350 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 THG1LQ9NWX6 298 aaKnown RBP12.91□□□□□ -0.34
SNX17-208ENST00000493711 TBC1D14Q9P2M4 693 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 EPS15L1Q9UBC2 864 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 TRIM10Q9UDY6 481 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 AMFRQ9UKV5 643 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 USP18Q9UMW8 372 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 SH3BP1Q9Y3L3 701 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 PLXNA3P51805 1871 aa12.91□□□□□ -0.34
SNX17-208ENST00000493711 SYNJ2BP-COX16A0A087WUM0 186 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 CCDC66A2RUB6 948 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 GRID2IPA4D2P6 1211 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 GRXCR2A6NFK2 248 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 KCNU1A8MYU2 1149 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 LEFTY2O00292 366 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 MDM4O15151 490 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 PSTPIP1O43586 416 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 PALMO75781 387 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 STC2O76061 302 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 COMTP21964 271 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 MIPP30301 263 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 HTR7P34969 479 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 ADRA1BP35368 520 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 SCAPQ12770 1279 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
SNX17-208ENST00000493711 EFHC2Q5JST6 749 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 FAM78AQ5JUQ0 283 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 STXBP5Q5T5C0 1151 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 OTUD1Q5VV17 481 aaPredicted RBP12.9□□□□□ -0.34
SNX17-208ENST00000493711 HTR3DQ70Z44 454 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 PEX26Q7Z412 305 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 MAP7D3Q8IWC1 876 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 UBL4BQ8N7F7 174 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 TDRD5Q8NAT2 981 aaKnown RBP12.9□□□□□ -0.34
SNX17-208ENST00000493711 SH3RF2Q8TEC5 729 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 USP13Q92995 863 aaPredicted RBP12.9□□□□□ -0.34
SNX17-208ENST00000493711 BTBD6Q96KE9 485 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 ZFRQ96KR1 1074 aaKnown RBP12.9□□□□□ -0.34
SNX17-208ENST00000493711 FCRL2Q96LA5 508 aaPredicted RBP12.9□□□□□ -0.34
SNX17-208ENST00000493711 C1orf74Q96LT6 269 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 SLC22A12Q96S37 553 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.34
SNX17-208ENST00000493711 ZFP14Q9HCL3 533 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 PIGVQ9NUD9 493 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 ARHGEF38Q9NXL2 777 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 DDX56Q9NY93 547 aaKnown RBP12.9□□□□□ -0.34
SNX17-208ENST00000493711 COX16Q9P0S2 106 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 CFAP97Q9P2B7 532 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.34
SNX17-208ENST00000493711 PATJQ8NI35 1801 aa12.9□□□□□ -0.34
SNX17-208ENST00000493711 A0A0U1RQJ8 604 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 KIF2AO00139 706 aaPredicted RBP12.89□□□□□ -0.35
SNX17-208ENST00000493711 MSI1O43347 362 aaKnown RBP12.89□□□□□ -0.35
SNX17-208ENST00000493711 ECI2O75521 394 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 TFE3P19532 575 aaPredicted RBP12.89□□□□□ -0.35
SNX17-208ENST00000493711 CHKAP35790 457 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 PITX1P78337 314 aaPredicted RBP12.89□□□□□ -0.35
SNX17-208ENST00000493711 USP4Q13107 963 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 ODF2Q5BJF6 829 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 ERMARDQ5T6L9 678 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 SH3PXD2AQ5TCZ1 1133 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 PTCRAQ6ISU1 281 aaPredicted RBP12.89□□□□□ -0.35
SNX17-208ENST00000493711 FAM131BQ86XD5 332 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 ZDHHC14Q8IZN3 488 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 DEPDC1BQ8WUY9 529 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 ATRIPQ8WXE1 791 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 ELSPBP1Q96BH3 223 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 ZSWIM3Q96MP5 696 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 MYADMQ96S97 322 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 C1QTNF1Q9BXJ1 281 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 TKTL2Q9H0I9 626 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 OSBPL2Q9H1P3 480 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 RETREG1Q9H6L5 497 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 SMPD4Q9NXE4 827 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 THEGQ9P2T0 379 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 PRKAG3Q9UGI9 489 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms