RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SV2AQ7L0J3 742 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 MARCH9Q86YJ5 346 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 DENND1CQ8IV53 801 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 FAM217AQ8IXS0 508 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 ARHGAP18Q8N392 663 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 DDI1Q8WTU0 396 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 SORCS1Q8WY21 1168 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 DUSP16Q9BY84 665 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 BLZF1Q9H2G9 400 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 TM9SF3Q9HD45 589 aa18.51■□□□□ 0.55
NUP50-218ENST00000493456 FAM149AA5PLN7 773 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 PAPSS1O43252 624 aaPredicted RBP18.5■□□□□ 0.55
NUP50-218ENST00000493456 DFNA5O60443 496 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 YEATS4O95619 227 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 SEMA4FO95754 770 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 HLA-DRAP01903 254 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 CASP1P29466 404 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 ACSL1P33121 698 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 ZBTB16Q05516 673 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 TMEM215Q68D42 235 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 SHC4Q6S5L8 630 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 TMPRSS12Q86WS5 348 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 PLD4Q96BZ4 506 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 BTBD1Q9H0C5 482 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 MARCH2Q9P0N8 246 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 CLEC4EQ9ULY5 219 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 SLCO1B1Q9Y6L6 691 aa18.5■□□□□ 0.55
NUP50-218ENST00000493456 POLR2DO15514 142 aaKnown RBP18.49■□□□□ 0.55
NUP50-218ENST00000493456 HLA-EP13747 358 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 CD27P26842 260 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 ZNF445P59923 1031 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 FNDC3BQ53EP0 1204 aaKnown RBP18.49■□□□□ 0.55
NUP50-218ENST00000493456 MPPE1Q53F39 396 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 RSRC2Q7L4I2 434 aaKnown RBP18.49■□□□□ 0.55
NUP50-218ENST00000493456 ADAT2Q7Z6V5 191 aaKnown RBP18.49■□□□□ 0.55
NUP50-218ENST00000493456 ADAM32Q8TC27 787 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 WFIKKN2Q8TEU8 576 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 NXPE2Q96DL1 559 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 INTS4Q96HW7 963 aaKnown RBP18.49■□□□□ 0.55
NUP50-218ENST00000493456 ZNF396Q96N95 335 aaPredicted RBP18.49■□□□□ 0.55
NUP50-218ENST00000493456 TMEM245Q9H330 911 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 FTSJ1Q9UET6 329 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 PLA2G4CQ9UP65 541 aa18.49■□□□□ 0.55
NUP50-218ENST00000493456 MUC22E2RYF6 1773 aaPredicted RBP18.48■□□□□ 0.55
NUP50-218ENST00000493456 TK2O00142 265 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 TSPAN3O60637 253 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 KIF20AO95235 890 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 CTSKP43235 329 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 BCAT1P54687 386 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 C19orf57Q0VDD7 668 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 CUL4BQ13620 913 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 TTC31Q49AM3 519 aaPredicted RBP18.48■□□□□ 0.55
NUP50-218ENST00000493456 PPP1R26Q5T8A7 1209 aaPredicted RBP18.48■□□□□ 0.55
NUP50-218ENST00000493456 DHRS13Q6UX07 377 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 BIRC7Q96CA5 298 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 CRELD1Q96HD1 420 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 NIF3L1Q9GZT8 377 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 SGK2Q9HBY8 427 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 FRMD4BQ9Y2L6 1034 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 PCDHGA1Q9Y5H4 931 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 TMEM131Q92545 1883 aa18.48■□□□□ 0.55
NUP50-218ENST00000493456 GOLGA4Q13439 2230 aaKnown RBP18.47■□□□□ 0.55
NUP50-218ENST00000493456 CABIN1Q9Y6J0 2220 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 COL5A1P20908 1838 aaPredicted RBP18.47■□□□□ 0.55
NUP50-218ENST00000493456 SLC12A8A0AV02 714 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 H0Y8X5 98 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 PDXKO00764 312 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 FSBPO95073 299 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 DNTTP04053 509 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 NR3C1P04150 777 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 CDK4P11802 303 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 CD58P19256 250 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 HOXD9P28356 352 aaPredicted RBP18.47■□□□□ 0.55
NUP50-218ENST00000493456 HNF1BP35680 557 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 GOLGA1Q92805 767 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 DCBLD2Q96PD2 775 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 UBXN6Q9BZV1 441 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 KCTD10Q9H3F6 313 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 APOBEC3GQ9HC16 384 aaKnown RBP18.47■□□□□ 0.55
NUP50-218ENST00000493456 CFAP46Q8IYW2 2715 aa18.47■□□□□ 0.55
NUP50-218ENST00000493456 MAPK13O15264 365 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 HLA-FP30511 346 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 AFMP43652 599 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 HARS2P49590 506 aaKnown RBP18.46■□□□□ 0.55
NUP50-218ENST00000493456 YWHAGP61981 247 aaKnown RBP eCLIP18.46■□□□□ 0.55
NUP50-218ENST00000493456 STK4Q13043 487 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 TRIP4Q15650 581 aaPredicted RBP18.46■□□□□ 0.55
NUP50-218ENST00000493456 CCDC157Q569K6 752 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 RAB41Q5JT25 222 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 C1orf220Q5T0J3 134 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 C6orf118Q5T5N4 469 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 CEP135Q66GS9 1140 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 LAYNQ6UX15 382 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 AHI1Q8N157 1196 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.46■□□□□ 0.55
NUP50-218ENST00000493456 KIAA0895Q8NCT3 520 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 CCDC150Q8NCX0 1101 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 COL26A1Q96A83 441 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 ACE2Q9BYF1 805 aaPredicted RBP18.46■□□□□ 0.55
NUP50-218ENST00000493456 OLA1Q9NTK5 396 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms