RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
USF1-206ENST00000491629 CBX4O00257 560 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 PLK4O00444 970 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 SPTLC2O15270 562 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 PCDHGA12O60330 932 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 TSPAN3O60637 253 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 CLSTN1O94985 981 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 ACADMP11310 421 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 HOXD9P28356 352 aaPredicted RBP13.86□□□□□ -0.19
USF1-206ENST00000491629 HLA-FP30511 346 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 CHKAP35790 457 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 CTSKP43235 329 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 GRIA4P48058 902 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 IL9RQ01113 521 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 AMPD3Q01432 767 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 STK4Q13043 487 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 EIF4HQ15056 248 aaKnown RBP13.86□□□□□ -0.19
USF1-206ENST00000491629 STK38Q15208 465 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 PPP1R26Q5T8A7 1209 aaPredicted RBP13.86□□□□□ -0.19
USF1-206ENST00000491629 BHLHA9Q7RTU4 235 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 SLC9A9Q8IVB4 645 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 GALNT15Q8N3T1 639 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 CPXM2Q8N436 756 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 PDCD7Q8N8D1 485 aaKnown RBP13.86□□□□□ -0.19
USF1-206ENST00000491629 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 KIAA0895Q8NCT3 520 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 OR2T3Q8NH03 318 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 CYB5D2Q8WUJ1 264 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 TMEM174Q8WUU8 243 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 UCMAQ8WVF2 138 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 BACH2Q9BYV9 841 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 CIPCQ9C0C6 399 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 PCED1AQ9H1Q7 454 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 KCTD10Q9H3F6 313 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 OSGEPQ9NPF4 335 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 CLIC5Q9NZA1 410 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 COL6A6A6NMZ7 2263 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 MYO18BQ8IUG5 2567 aa13.86□□□□□ -0.19
USF1-206ENST00000491629 PVALEFA0A1B0GWK0 134 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 POLR2DO15514 142 aaKnown RBP13.85□□□□□ -0.19
USF1-206ENST00000491629 TLX3O43711 291 aaPredicted RBP13.85□□□□□ -0.19
USF1-206ENST00000491629 PPP6R2O75170 966 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 RPN1P04843 607 aaKnown RBP13.85□□□□□ -0.19
USF1-206ENST00000491629 PSEN1P49768 467 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 RPS14P62263 151 aaKnown RBP13.85□□□□□ -0.19
USF1-206ENST00000491629 COG7P83436 770 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 CCDC157Q569K6 752 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 PRAMEF14Q5SWL7 426 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 SERPINA13PQ6UXR4 307 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 KIAA0907Q7Z7F0 614 aaPredicted RBP13.85□□□□□ -0.19
USF1-206ENST00000491629 ADIPOR2Q86V24 386 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 PIP4K2CQ8TBX8 421 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 NDRG1Q92597 394 aaKnown RBP13.85□□□□□ -0.19
USF1-206ENST00000491629 TAF4BQ92750 862 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 IGSF8Q969P0 613 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 NT5C1AQ9BXI3 368 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 DUSP16Q9BY84 665 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 SLC2A11Q9BYW1 496 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 LHX5Q9H2C1 402 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 MTG2Q9H4K7 406 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 EBF2Q9HAK2 575 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 RAI2Q9Y5P3 530 aa13.85□□□□□ -0.19
USF1-206ENST00000491629 PAPSS1O43252 624 aaPredicted RBP13.84□□□□□ -0.19
USF1-206ENST00000491629 STX6O43752 255 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 SEMA4FO95754 770 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 WNT1P04628 370 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 IGHV4-34P06331 123 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 P4HA1P13674 534 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 GRK6P43250 576 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 AFMP43652 599 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 CCT8P50990 548 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 SGSHP51688 502 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 SUZ12Q15022 739 aaKnown RBP13.84□□□□□ -0.19
USF1-206ENST00000491629 SHBQ15464 509 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 RAB41Q5JT25 222 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 WFDC5Q8TCV5 224 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 TMC2Q8TDI7 906 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 TAS1R2Q8TE23 839 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 DDI1Q8WTU0 396 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 DCLK3Q9C098 648 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 PRORYQ9H606 182 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 PRSS16Q9NQE7 514 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 MARCH2Q9P0N8 246 aa13.84□□□□□ -0.19
USF1-206ENST00000491629 SLC12A8A0AV02 714 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 C10orf142B7Z368 130 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 TULP2O00295 520 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 CUTAO60888 179 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 FSBPO95073 299 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 RALAP11233 206 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 CD58P19256 250 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 CD27P26842 260 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 PIK3CAP42336 1068 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 ABCG1P45844 678 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 PPP3CAQ08209 521 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 DNAJC3Q13217 504 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 TRIP4Q15650 581 aaPredicted RBP13.83□□□□□ -0.2
USF1-206ENST00000491629 GATAD2AQ86YP4 633 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 MYO19Q96H55 970 aa13.83□□□□□ -0.2
USF1-206ENST00000491629 UBL7Q96S82 380 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms