RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 FNIP2Q9P278 1114 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 STK39Q9UEW8 545 aa23.62■■□□□ 1.37
USF3-203ENST00000491165 GREB1Q4ZG55 1949 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 CFAP73A6NFT4 308 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 HHLA1C9JL84 531 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 SUN1O94901 812 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 SEC24AO95486 1093 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 ERBB2P04626 1255 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 PHF13Q86YI8 300 aaPredicted RBP23.61■■□□□ 1.37
USF3-203ENST00000491165 PLCD3Q8N3E9 789 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 ZNF461Q8TAF7 563 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 CKAP2Q8WWK9 683 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 PIWIL1Q96J94 861 aaKnown RBP23.61■■□□□ 1.37
USF3-203ENST00000491165 VCPIP1Q96JH7 1222 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 OXCT2Q9BYC2 517 aaPredicted RBP23.61■■□□□ 1.37
USF3-203ENST00000491165 DNAI2Q9GZS0 605 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 CEP83Q9Y592 693 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 PCDHB5Q9Y5E4 795 aa23.61■■□□□ 1.37
USF3-203ENST00000491165 E5RJQ4 531 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 TAS2R40P59535 323 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 RAB33AQ14088 237 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 IZUMO3Q5VZ72 239 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 NUGGCQ68CJ6 796 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 RELL1Q8IUW5 271 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 GPR65Q8IYL9 337 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 PWWP2AQ96N64 755 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 CCDC77Q9BR77 488 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 SCINQ9Y6U3 715 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 XPO1O14980 1071 aaKnown RBP23.6■■□□□ 1.37
USF3-203ENST00000491165 LPXNO60711 386 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 CDH16O75309 829 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 SPATA31D3P0C874 917 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 MAMLD1Q13495 774 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 DDR2Q16832 855 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 SPATA31D4Q6ZUB0 917 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 EXD1Q8NHP7 514 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 GPR152Q8TDT2 470 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 MICAL1Q8TDZ2 1067 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 FUBP3Q96I24 572 aaKnown RBP eCLIP23.6■■□□□ 1.37
USF3-203ENST00000491165 KLHL5Q96PQ7 755 aa23.6■■□□□ 1.37
USF3-203ENST00000491165 ZNF638Q14966 1978 aaKnown RBP23.59■■□□□ 1.37
USF3-203ENST00000491165 SETSIPP0DME0 302 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 SLC8A1P32418 973 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 NDUFV1P49821 464 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 WLSQ5T9L3 541 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 CEP128Q6ZU80 1094 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 ERICH1Q86X53 443 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 CLEC4CQ8WTT0 213 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 FAM118BQ9BPY3 351 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 SLC4A5Q9BY07 1137 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 MLXIPLQ9NP71 852 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.59■■□□□ 1.37
USF3-203ENST00000491165 FOXO6A8MYZ6 492 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 GJB6O95452 261 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 GRIK1P39086 918 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 SSR1P43307 286 aaKnown RBP23.59■■□□□ 1.37
USF3-203ENST00000491165 STAT4Q14765 748 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 PLEKHA7Q6IQ23 1121 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 PPP1R2P3Q6NXS1 205 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 ARHGEF18Q6ZSZ5 1173 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 CYP4X1Q8N118 509 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 GDAP1Q8TB36 358 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 PLCD4Q9BRC7 762 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 TACO1Q9BSH4 297 aaKnown RBP23.59■■□□□ 1.37
USF3-203ENST00000491165 USTQ9Y2C2 406 aa23.59■■□□□ 1.37
USF3-203ENST00000491165 TGM5O43548 720 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 UBOX5O94941 541 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 ATP6V1G2O95670 118 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 STX2P32856 288 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 RPL34P49207 117 aaKnown RBP23.58■■□□□ 1.37
USF3-203ENST00000491165 MPP2Q14168 576 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 LRIT3Q3SXY7 679 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 MGAT5BQ3V5L5 792 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 GSTA5Q7RTV2 222 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 ADGRD2Q7Z7M1 963 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 SCN4BQ8IWT1 228 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 GBP7Q8N8V2 638 aaPredicted RBP23.58■■□□□ 1.37
USF3-203ENST00000491165 SPPL2BQ8TCT7 592 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 SEPT5Q99719 369 aaPredicted RBP23.58■■□□□ 1.37
USF3-203ENST00000491165 FOXP3Q9BZS1 431 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 DMAP1Q9NPF5 467 aaPredicted RBP23.58■■□□□ 1.37
USF3-203ENST00000491165 NKIRAS1Q9NYS0 192 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 TBK1Q9UHD2 729 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 NAALADL1Q9UQQ1 740 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 ACTL7BQ9Y614 415 aa23.58■■□□□ 1.37
USF3-203ENST00000491165 ATF6P18850 670 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 GJC1P36383 396 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 CETN2P41208 172 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 LMNB2Q03252 620 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 C1QBPQ07021 282 aaKnown RBP23.57■■□□□ 1.36
USF3-203ENST00000491165 SPATA21Q7Z572 469 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 TMEM110Q86TL2 294 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 SCUBE3Q8IX30 993 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 NDRG1Q92597 394 aaKnown RBP23.57■■□□□ 1.36
USF3-203ENST00000491165 MYCBPQ99417 103 aaPredicted RBP23.57■■□□□ 1.36
USF3-203ENST00000491165 AFF4Q9UHB7 1163 aaKnown RBP23.57■■□□□ 1.36
USF3-203ENST00000491165 ARL2BPQ9Y2Y0 163 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 MTCL1Q9Y4B5 1905 aaKnown RBP23.57■■□□□ 1.36
USF3-203ENST00000491165 PER2O15055 1255 aa23.57■■□□□ 1.36
USF3-203ENST00000491165 LCP1P13796 627 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms