RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ADAM7Q9H2U9 754 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 DTLQ9NZJ0 730 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 EFR3BQ9Y2G0 817 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 TLL1O43897 1013 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 BANF1O75531 89 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 BAIAP3O94812 1187 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 LRIG2O94898 1065 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 ERCC2P18074 760 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 HSD17B3P37058 310 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 TMC3Q7Z5M5 1100 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.41□□□□□ -0.1
SMPD4-219ENST00000491128 SLCO2A1Q92959 643 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 ART4Q93070 314 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 CAVIN3Q969G5 261 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 SNF8Q96H20 258 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 CELF6Q96J87 481 aaKnown RBP14.41□□□□□ -0.1
SMPD4-219ENST00000491128 FBXO44Q9H4M3 255 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 ANAPC5Q9UJX4 755 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 PTPRDP23468 1912 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 TCRBV7S3A2A0A539 114 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 AGPSO00116 658 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 PRRG1O14668 218 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 POLR3GO15318 223 aaPredicted RBP14.4□□□□□ -0.1
SMPD4-219ENST00000491128 PAGE1O75459 146 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 ITGAVP06756 1048 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 ATP2A2P16615 1042 aaKnown RBP14.4□□□□□ -0.1
SMPD4-219ENST00000491128 EPHB2P29323 1055 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 RPL22P35268 128 aaKnown RBP14.4□□□□□ -0.1
SMPD4-219ENST00000491128 TPI1P60174 286 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 DMTNQ08495 405 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 ANKRD22Q5VYY1 191 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 NPWQ8N729 165 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 RUBCNQ92622 972 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 FAF2Q96CS3 445 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 ZNF512Q96ME7 567 aaPredicted RBP14.4□□□□□ -0.1
SMPD4-219ENST00000491128 ZIM3Q96PE6 472 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 SEMA4AQ9H3S1 761 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 FEZ2Q9UHY8 353 aaPredicted RBP14.4□□□□□ -0.1
SMPD4-219ENST00000491128 PCDHB12Q9Y5F1 795 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 SLC4A7Q9Y6M7 1214 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 CNPP09543 421 aaKnown RBP14.4□□□□□ -0.1
SMPD4-219ENST00000491128 ERVFC1P60507 584 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 PLD1Q13393 1074 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 C9orf50Q5SZB4 431 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 TMC7Q7Z402 723 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 C14orf80Q86SX3 495 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 DDX53Q86TM3 631 aaKnown RBP14.4□□□□□ -0.1
SMPD4-219ENST00000491128 HERC6Q8IVU3 1022 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 TTC13Q8NBP0 860 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 CCNYQ8ND76 341 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 CCDC110Q8TBZ0 833 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 FAM71BQ8TC56 605 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 C17orf80Q9BSJ5 609 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 AAASQ9NRG9 546 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
SMPD4-219ENST00000491128 NDFIP2Q9NV92 336 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 MPP6Q9NZW5 540 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 SEPT10Q9P0V9 454 aa14.4□□□□□ -0.1
SMPD4-219ENST00000491128 IGLV3-25P01717 112 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 DNAJB1P25685 340 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 IRAK1P51617 712 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 TWF1Q12792 350 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 ARL13BQ3SXY8 428 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 PGAP3Q96FM1 320 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-219ENST00000491128 FCRL2Q96LA5 508 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-219ENST00000491128 RUNDC3BQ96NL0 473 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 SMOC2Q9H3U7 446 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 CERS4Q9HA82 394 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 USP29Q9HBJ7 922 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 DRG1Q9Y295 367 aaKnown RBP14.39□□□□□ -0.11
SMPD4-219ENST00000491128 BACE2Q9Y5Z0 518 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-219ENST00000491128 GOLGA6BA6NDN3 693 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 HIDE1A8MVS5 230 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 TLR5O60602 858 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 EFCAB14O75071 495 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 KCNQ1P51787 676 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 BASP1P80723 227 aaKnown RBP14.39□□□□□ -0.11
SMPD4-219ENST00000491128 DRICH1Q6PGQ1 229 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-219ENST00000491128 CAPN12Q6ZSI9 719 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 NCAPGQ9BPX3 1015 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.39□□□□□ -0.11
SMPD4-219ENST00000491128 YIPF1Q9Y548 306 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 INSL6Q9Y581 213 aa14.39□□□□□ -0.11
SMPD4-219ENST00000491128 SLC12A8A0AV02 714 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 H3BRJ5 948 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 ABLIM3O94929 683 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 CXCL14O95715 111 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 F9P00740 461 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 GBP1P32455 592 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 DRG2P55039 364 aaKnown RBP14.38□□□□□ -0.11
SMPD4-219ENST00000491128 RPL10AP62906 217 aaKnown RBP14.38□□□□□ -0.11
SMPD4-219ENST00000491128 AP1B1Q10567 949 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 EIF4EBP2Q13542 120 aaPredicted RBP14.38□□□□□ -0.11
SMPD4-219ENST00000491128 DPYSQ14117 519 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 TAF12Q16514 161 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 PLPP4Q5VZY2 271 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 CYP2S1Q96SQ9 504 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 AFF4Q9UHB7 1163 aaKnown RBP14.38□□□□□ -0.11
SMPD4-219ENST00000491128 PLAAQ9Y263 795 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms