RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 TKTL2Q9H0I9 626 aa11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 LINC00597Q9H2U6 94 aa11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 KCNK12Q9HB15 430 aa11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 LZTFL1Q9NQ48 299 aa11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 TRMT1Q9NXH9 659 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 OBP2AQ9NY56 170 aa11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 PRKAG3Q9UGI9 489 aa11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 PCSK1NQ9UHG2 260 aa11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 AGO1Q9UL18 857 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 GUCA1BQ9UMX6 200 aa11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 C5orf42Q9H799 3197 aa11.18□□□□□ -0.62
CACNA1C-227ENST00000491104 MIA3Q5JRA6 1907 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 XIRP2A4UGR9 3374 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 E2F8A0AVK6 867 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 BTNL10A8MVZ5 291 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 KCNU1A8MYU2 1149 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 ACSL4O60488 711 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 BUB1BO60566 1050 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 TSPAN3O60637 253 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 TNNT1P13805 278 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 PSMC3P17980 439 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 IL1R2P27930 398 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 MIPP30301 263 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 GDI1P31150 447 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 SLC6A4P31645 630 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 CCR1P32246 355 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 SSR1P43307 286 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 IFNAR2P48551 515 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 KPNA1P52294 538 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 TAS2R40P59535 323 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 RING1Q06587 406 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 TNK2Q07912 1038 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 PIGHQ14442 188 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 PIK3R6Q5UE93 754 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 RAP1GAP2Q684P5 730 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 NUGGCQ68CJ6 796 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 TXNRD3NBQ6F5E7 133 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 CC2D1AQ6P1N0 951 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 YAF2Q8IY57 180 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 C17orf53Q8N3J3 647 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 NIPA2Q8N8Q9 360 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 TPCN2Q8NHX9 752 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 TTC8Q8TAM2 541 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 DEPDC1BQ8WUY9 529 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 E2F7Q96AV8 911 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 MYEOVQ96EZ4 313 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 EBF3Q9H4W6 596 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 WDCPQ9H6R7 721 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 ZWILCHQ9H900 591 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 CD320Q9NPF0 282 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 KLHL11Q9NVR0 708 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 DUS2Q9NX74 493 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 ARHGEF38Q9NXL2 777 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 CAPN6Q9Y6Q1 641 aa11.17□□□□□ -0.62
CACNA1C-227ENST00000491104 GRID2IPA4D2P6 1211 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 PAGE1O75459 146 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 RNF8O76064 485 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 F9P00740 461 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 DESP17661 470 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 COMTP21964 271 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 HARS2P49590 506 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 IRAK1P51617 712 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 SGSHP51688 502 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 HADHBP55084 474 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 FCHO2Q0JRZ9 810 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 PPP2R5DQ14738 602 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 CA9Q16790 459 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 SMTNL2Q2TAL5 461 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 EML3Q32P44 896 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 ARHGAP29Q52LW3 1261 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 FAM133BQ5BKY9 247 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 KCNT1Q5JUK3 1230 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 BRMS1LQ5PSV4 323 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 RFWD3Q6PCD5 774 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 CYP4V2Q6ZWL3 525 aaPredicted RBP11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 HTR3DQ70Z44 454 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 C14orf80Q86SX3 495 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 UNC45BQ8IWX7 931 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 REXO1L1PQ8IX06 675 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 PYROXD2Q8N2H3 581 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 TXLNBQ8N3L3 684 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 SLC44A3Q8N4M1 653 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 ATP6V0D2Q8N8Y2 350 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 OSCP1Q8WVF1 389 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 BHMTQ93088 406 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 P2RY11Q96G91 374 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 SNRNP25Q9BV90 132 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 TRMT61BQ9BVS5 477 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 TSGA10Q9BZW7 698 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 DCLK3Q9C098 648 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 SIK2Q9H0K1 926 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 HPS4Q9NQG7 708 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 IGSF9Q9P2J2 1179 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 FZD10Q9ULW2 581 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 HS3ST4Q9Y661 456 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 UNC80Q8N2C7 3258 aa11.16□□□□□ -0.62
CACNA1C-227ENST00000491104 OTOL1A6NHN0 477 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-227ENST00000491104 CHADO15335 359 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms