RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 HSH2DQ96JZ2 352 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ZFYVE19Q96K21 471 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 WDR24Q96S15 920 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 MMS19Q96T76 1030 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ACBD6Q9BR61 282 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SMG9Q9H0W8 520 aaKnown RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ISCUQ9H1K1 167 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 TASP1Q9H6P5 420 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 DDX43Q9NXZ2 648 aaKnown RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 ABI2Q9NYB9 513 aaPredicted RBP7.95□□□□□ -1.14
CLDN1-202ENST00000490800 GTSE1Q9NYZ3 720 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 SALL4Q9UJQ4 1053 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 GTF3C4Q9UKN8 822 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 L1RE1Q9UN81 338 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 PAXBP1Q9Y5B6 917 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 NME7Q9Y5B8 376 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 PCDHB5Q9Y5E4 795 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 CACNA1IQ9P0X4 2223 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 MYH10P35580 1976 aa7.95□□□□□ -1.14
CLDN1-202ENST00000490800 FAM170AA1A519 330 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 MACROD2A1Z1Q3 448 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 ANKRD62A6NC57 917 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 HCRTO43612 131 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 TACC1O75410 805 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 MOCS3O95396 460 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 PRAMEF12O95522 483 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 FTLP02792 175 aaPredicted RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 F11P03951 625 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 TMEM253P0C7T8 217 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 CHRNB1P11230 501 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 UNGP13051 313 aaPredicted RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 HMGA1P17096 107 aaKnown RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 CYP2F1P24903 491 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 MSX1P28360 303 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 CDC25CP30307 473 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 ID4P47928 161 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 MLLT6P55198 1093 aaPredicted RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 TSPY1Q01534 308 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 NFE2Q16621 373 aaPredicted RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 DDR2Q16832 855 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 ZNF569Q5MCW4 686 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 DNTTIP2Q5QJE6 756 aaKnown RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 SDHAF4Q5VUM1 108 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 NAA35Q5VZE5 725 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 ACAD10Q6JQN1 1059 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 TRIM72Q6ZMU5 477 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 TMEM150AQ86TG1 271 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 OSTM1Q86WC4 334 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 PASD1Q8IV76 773 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 KIAA2013Q8IYS2 634 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 SLC35F6Q8N357 371 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 RNF10Q8N5U6 811 aaKnown RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 TOP6BLQ8N6T0 577 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 MAB21L3Q8N8X9 362 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 ZBTB44Q8NCP5 570 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 STKLD1Q8NE28 680 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 KBTBD7Q8WVZ9 684 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 RUBCNQ92622 972 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 NELL1Q92832 810 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 SECISBP2LQ93073 1101 aaKnown RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 ARHGEF26Q96DR7 871 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 CYFIP2Q96F07 1278 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 TMEM176AQ96HP8 235 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 NT5C1AQ9BXI3 368 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 CHRDQ9H2X0 955 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 C8orf33Q9H7E9 229 aaPredicted RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 RBM12Q9NTZ6 932 aaKnown RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 ZSCAN32Q9NX65 697 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 OBP2AQ9NY56 170 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 MYO1AQ9UBC5 1043 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 DNAI1Q9UI46 699 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 DCTN4Q9UJW0 460 aa7.94□□□□□ -1.14
CLDN1-202ENST00000490800 MAGED2Q9UNF1 606 aaPredicted RBP7.94□□□□□ -1.14
CLDN1-202ENST00000490800 A0A0A6YYK5 440 aaPredicted RBP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 MYBPHLA2RUH7 354 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 SPECC1L-ADORA2AF8WAN1 911 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 O00370 1275 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 GABRDO14764 452 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 NDUFB5O43674 189 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 ATP2C2O75185 946 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 LSM8O95777 96 aaKnown RBP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 FAM163BP0C2L3 166 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CSH1P0DML2 217 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CSH2P0DML3 217 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 VDRP11473 427 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CD19P15391 556 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 ABCB4P21439 1286 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 WARSP23381 471 aaKnown RBP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 LMO2P25791 158 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CDH5P33151 784 aaPredicted RBP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 GNL1P36915 607 aaPredicted RBP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CXCL12P48061 93 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 LHX1P48742 406 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 NOMO3P69849 1222 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 TNK2Q07912 1038 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 GAS6Q14393 721 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 CCDC142Q17RM4 750 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.93□□□□□ -1.14
CLDN1-202ENST00000490800 TXNDC8Q6A555 127 aa7.93□□□□□ -1.14
CLDN1-202ENST00000490800 DENND1BQ6P3S1 775 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms