RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 FMNL3Q8IVF7 1028 aa18.59■□□□□ 0.57
YIPF3-208ENST00000490447 SIX6OS1Q8N1H7 587 aa18.59■□□□□ 0.57
YIPF3-208ENST00000490447 KLK13Q9UKR3 277 aa18.59■□□□□ 0.57
YIPF3-208ENST00000490447 MSRB2Q9Y3D2 182 aa18.59■□□□□ 0.57
YIPF3-208ENST00000490447 TIMM44O43615 452 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 ZNF445P59923 1031 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 MCCD1P59942 119 aaPredicted RBP18.58■□□□□ 0.57
YIPF3-208ENST00000490447 PDE4CQ08493 712 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 ADIGQ0VDE8 80 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 CUL2Q13617 745 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 CBWD6Q4V339 395 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 CBWD3Q5JTY5 395 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 CBWD5Q5RIA9 395 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 DCAF12L1Q5VU92 463 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 PM20D1Q6GTS8 502 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 FAM217AQ8IXS0 508 aa18.58■□□□□ 0.57
YIPF3-208ENST00000490447 ZCCHC9Q8N567 271 aaKnown RBP18.58■□□□□ 0.57
YIPF3-208ENST00000490447 HBS1LQ9Y450 684 aaKnown RBP18.58■□□□□ 0.57
YIPF3-208ENST00000490447 PCDH15Q96QU1 1955 aa18.58■□□□□ 0.56
YIPF3-208ENST00000490447 PI4KAP42356 2102 aa18.58■□□□□ 0.56
YIPF3-208ENST00000490447 CEP192Q8TEP8 1941 aa18.58■□□□□ 0.56
YIPF3-208ENST00000490447 ADAMTS9Q9P2N4 1935 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 KCNJ18B7U540 433 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 SH3BP5O60239 455 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 COPAP53621 1224 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 FAM193AP78312 1265 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 TRIP4Q15650 581 aaPredicted RBP18.57■□□□□ 0.56
YIPF3-208ENST00000490447 TRIP6Q15654 476 aaKnown RBP18.57■□□□□ 0.56
YIPF3-208ENST00000490447 NAXDQ8IW45 347 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 SORCS1Q8WY21 1168 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 DNASE2BQ8WZ79 361 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 NUP58Q9BVL2 599 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 ABCC13Q9NSE7 274 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 RALYQ9UKM9 306 aaKnown RBP18.57■□□□□ 0.56
YIPF3-208ENST00000490447 CLEC4EQ9ULY5 219 aa18.57■□□□□ 0.56
YIPF3-208ENST00000490447 IGF2RP11717 2491 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 TULP2O00295 520 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 TSPAN3O60637 253 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 GJB3O75712 270 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 SETSIPP0DME0 302 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 TBXAS1P24557 533 aaPredicted RBP18.56■□□□□ 0.56
YIPF3-208ENST00000490447 PRKCHP24723 683 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 PRCPP42785 496 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 FKBP3Q00688 224 aaKnown RBP18.56■□□□□ 0.56
YIPF3-208ENST00000490447 PNOCQ13519 176 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 FNDC3BQ53EP0 1204 aaKnown RBP18.56■□□□□ 0.56
YIPF3-208ENST00000490447 CHCHD4Q8N4Q1 142 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 WFIKKN2Q8TEU8 576 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 NDRG1Q92597 394 aaKnown RBP18.56■□□□□ 0.56
YIPF3-208ENST00000490447 EDEM1Q92611 657 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 CAMK1GQ96NX5 476 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 GDPD2Q9HCC8 539 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 SFMBT1Q9UHJ3 866 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 PLA2G4CQ9UP65 541 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 COQ4Q9Y3A0 265 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 AKAP13Q12802 2813 aa18.56■□□□□ 0.56
YIPF3-208ENST00000490447 GOLGA6L4A6NEF3 574 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 BCAT2O15382 392 aaPredicted RBP18.55■□□□□ 0.56
YIPF3-208ENST00000490447 CER1O95813 267 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 LATS1O95835 1130 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 VDRP11473 427 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 HOXD9P28356 352 aaPredicted RBP18.55■□□□□ 0.56
YIPF3-208ENST00000490447 ZNF658Q5TYW1 1059 aaPredicted RBP18.55■□□□□ 0.56
YIPF3-208ENST00000490447 BSPRYQ5W0U4 402 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 TMEM215Q68D42 235 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 IL27RAQ6UWB1 636 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 OR2T3Q8NH03 318 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 UBA3Q8TBC4 463 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 SNX19Q92543 992 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 TMA16Q96EY4 203 aaKnown RBP18.55■□□□□ 0.56
YIPF3-208ENST00000490447 CNGB3Q9NQW8 809 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 ARMCX3Q9UH62 379 aaPredicted RBP18.55■□□□□ 0.56
YIPF3-208ENST00000490447 KIAA1257Q9ULG3 409 aa18.55■□□□□ 0.56
YIPF3-208ENST00000490447 SRRM3A6NNA2 597 aaPredicted RBP18.54■□□□□ 0.56
YIPF3-208ENST00000490447 YJEFN3A6XGL0 299 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 METTL12A8MUP2 240 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 E7ENQ6 273 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 SMC2O95347 1197 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 IGLV3-19P01714 112 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 HLA-EP13747 358 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 LCP1P13796 627 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 HLA-FP30511 346 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 LRRC63Q05C16 580 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 LRMPQ12912 555 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 ADGRF1Q5T601 910 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 CHST9Q7L1S5 443 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 BHLHA9Q7RTU4 235 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 FAM124AQ86V42 546 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 AHI1Q8N157 1196 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 KCTD13Q8WZ19 329 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 GOLGA1Q92805 767 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 GSDMAQ96QA5 445 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 LHX5Q9H2C1 402 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 GAREM1Q9H706 876 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 ABCB8Q9NUT2 735 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 EIF2B4Q9UI10 523 aaKnown RBP18.54■□□□□ 0.56
YIPF3-208ENST00000490447 GGA2Q9UJY4 613 aa18.54■□□□□ 0.56
YIPF3-208ENST00000490447 FTH1P19P0C7X4 201 aa18.53■□□□□ 0.56
YIPF3-208ENST00000490447 MATKP42679 507 aa18.53■□□□□ 0.56
YIPF3-208ENST00000490447 COBLL1Q53SF7 1204 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms