RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 SPATA33Q96N06 139 aa3.81□□□□□ -1.8
RPS6KC1-204ENST00000490299 CDK5RAP1Q96SZ6 601 aaKnown RBP3.81□□□□□ -1.8
RPS6KC1-204ENST00000490299 FHDC1Q9C0D6 1143 aaPredicted RBP3.81□□□□□ -1.8
RPS6KC1-204ENST00000490299 PAIP1Q9H074 479 aaKnown RBP3.81□□□□□ -1.8
RPS6KC1-204ENST00000490299 EPB41L4AQ9HCS5 686 aaPredicted RBP3.81□□□□□ -1.8
RPS6KC1-204ENST00000490299 LSM7Q9UK45 103 aaKnown RBP3.81□□□□□ -1.8
RPS6KC1-204ENST00000490299 ACOT9Q9Y305 439 aa3.81□□□□□ -1.8
RPS6KC1-204ENST00000490299 HBS1LQ9Y450 684 aaKnown RBP3.81□□□□□ -1.8
RPS6KC1-204ENST00000490299 PCDHA11Q9Y5I1 949 aa3.81□□□□□ -1.8
RPS6KC1-204ENST00000490299 CLRN2A0PK11 232 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 LRRC10BA6NIK2 292 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 TMEM88BA6NKF7 163 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 FAM220BPB1ANY3 271 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 C19orf81C9J6K1 198 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 TGDSO95455 350 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 SGPL1O95470 568 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 CRTAMO95727 393 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 CYP11B2P19099 503 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 RPL21P46778 160 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 RFX5P48382 616 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 PTDSS1P48651 473 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 OTUD4Q01804 1114 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 GCNT1Q02742 428 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 IRF5Q13568 498 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ATP1A4Q13733 1029 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 SF3B3Q15393 1217 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 PDK4Q16654 411 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ATF7IP2Q5U623 682 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 PTRHD1Q6GMV3 140 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 NECAB2Q7Z6G3 386 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 NT5DC3Q86UY8 548 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ADHFE1Q8IWW8 467 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 MYO1HQ8N1T3 1032 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 GMCL1P1Q8NEA9 526 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 FLCNQ8NFG4 579 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 RP9Q8TA86 221 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 FBXO25Q8TCJ0 367 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 REPS1Q96D71 796 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 FAM84BQ96KN1 310 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 PPP1R36Q96LQ0 422 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 NSMCE2Q96MF7 247 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 VAT1Q99536 393 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ZNF446Q9NWS9 450 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ADPRHL2Q9NX46 363 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 WWOXQ9NZC7 414 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 AGAP1Q9UPQ3 857 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 SH3GLB1Q9Y371 365 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ARIH1Q9Y4X5 557 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 SAGE2PA6NJ88 616 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ERI2A8K979 691 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 NR5A2O00482 541 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 PEX1O43933 1283 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ECE2O60344 883 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 SNAPC5O75971 98 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ABCB1P08183 1280 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 PLEKP08567 350 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 CCDC166P0CW27 439 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 NPR3P17342 541 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 TFE3P19532 575 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 WARSP23381 471 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 PRDX5P30044 214 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 POLD2P49005 469 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 KPNA1P52294 538 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 SNAP25P60880 206 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 RPS6P62753 249 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 FASTKQ14296 549 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ZNF268Q14587 947 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 WDR72Q3MJ13 1102 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ZNF618Q5T7W0 954 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 CES5AQ6NT32 575 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 DENND5BQ6ZUT9 1274 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 NIPA1Q7RTP0 329 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 CDH24Q86UP0 819 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 EXOC3L1Q86VI1 746 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 TMEM132CQ8N3T6 1108 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ZSCAN1Q8NBB4 408 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 CHST13Q8NET6 341 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 AGAP11Q8TF27 550 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 AP3S1Q92572 193 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 Q96MT0 163 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 SRPK1Q96SB4 655 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ARMC7Q9H6L4 198 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 RGS18Q9NS28 235 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 RYDENQ9NUL5 291 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 EURLQ9NYK6 297 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 AK5Q9Y6K8 562 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 IFRD1O00458 451 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 C2CD2LO14523 706 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 AP5Z1O43299 807 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 DDHD2O94830 711 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 CYP1A2P05177 515 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 UQCRBP14927 111 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 ATP6V1B2P21281 511 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 CHI3L1P36222 383 aaPredicted RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 SREBF1P36956 1147 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 PRIM2P49643 509 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 RENBPP51606 427 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 GIT2Q14161 759 aa3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 RRP1BQ14684 758 aaKnown RBP3.8□□□□□ -1.8
RPS6KC1-204ENST00000490299 NR1D2Q14995 579 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms