RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 NRDE2Q9H7Z3 1164 aa7.07□□□□□ -1.28
TM9SF3-206ENST00000490192 SEMA4BQ9NPR2 832 aaPredicted RBP7.07□□□□□ -1.28
TM9SF3-206ENST00000490192 TLR8Q9NR97 1041 aaKnown RBP7.07□□□□□ -1.28
TM9SF3-206ENST00000490192 PPP1R14DQ9NXH3 145 aa7.07□□□□□ -1.28
TM9SF3-206ENST00000490192 HECAQ9UBI9 543 aaPredicted RBP7.07□□□□□ -1.28
TM9SF3-206ENST00000490192 STEAP1Q9UHE8 339 aa7.07□□□□□ -1.28
TM9SF3-206ENST00000490192 UBE2J1Q9Y385 318 aaPredicted RBP7.07□□□□□ -1.28
TM9SF3-206ENST00000490192 NEU2Q9Y3R4 380 aa7.07□□□□□ -1.28
TM9SF3-206ENST00000490192 SPATA31A3Q5VYP0 1347 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 RPGRIP1LQ68CZ1 1315 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3DA0A087WVF3 549 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3IA0A087WXS9 549 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3EA0A087X179 549 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3KA0A087X1G2 549 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3BA6NDS4 549 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3FA6NER0 549 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 SH2D7A6NKC9 451 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3LB9A6J9 549 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 H7C0S8 307 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 M0QZQ0 153 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 IPO13O94829 963 aaKnown RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 PGM3O95394 542 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TUBB4AP04350 444 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3HP0C7X1 549 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TMEM225BP0DP42 221 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 ALADP13716 330 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 CR2P20023 1033 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 IL11P20809 199 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 FGFR4P22455 802 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 CDH15P55291 814 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 RPL15P61313 204 aaKnown RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 SEMA3BQ13214 749 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 RASA2Q15283 850 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 ELAVL1Q15717 326 aaKnown RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 METTL24Q5JXM2 366 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 FAM102AQ5T9C2 384 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 FAM90A2PQ658T7 463 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 SLC9A4Q6AI14 798 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3GQ6DHY5 549 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3CQ6IPX1 549 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 RPUSD3Q6P087 351 aaKnown RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 CLNKQ7Z7G1 428 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 IZUMO1Q8IYV9 350 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TBC1D3Q8IZP1 549 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 MDGA1Q8NFP4 955 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 OR56A1Q8NGH5 318 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 SSH3Q8TE77 659 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 ATP6V1E2Q96A05 226 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 ARRDC3Q96B67 414 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 KIF1BPQ96EK5 621 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 MASTLQ96GX5 879 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 TEPSINQ96N21 525 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 NR1H4Q96RI1 486 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 KCNK9Q9NPC2 374 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 PCDHB16Q9NRJ7 776 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 ALKBH4Q9NXW9 302 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 SARDHQ9UL12 918 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 DRG1Q9Y295 367 aaKnown RBP7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 ENTPD2Q9Y5L3 495 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 LYVE1Q9Y5Y7 322 aa7.06□□□□□ -1.28
TM9SF3-206ENST00000490192 A0A1B0GTW7 788 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 MROH6A6NGR9 719 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 LEFTY2O00292 366 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 TNFSF14O43557 240 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 ERN1O75460 977 aaKnown RBP7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 ERAL1O75616 437 aaKnown RBP7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 BEST1O76090 585 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 VNN1O95497 513 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 SPARCP09486 303 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 TNNT1P13805 278 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 NFKBIAP25963 317 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 TM4SF1P30408 202 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 GPD2P43304 727 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 RCAN1P53805 252 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 EIF4A1P60842 406 aaKnown RBP7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 SP2Q02086 613 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 NHLH2Q02577 135 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 DYRK1AQ13627 763 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 THOC5Q13769 683 aaKnown RBP7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 CD300EQ496F6 205 aaPredicted RBP7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 FOXR2Q6PJQ5 311 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 ADGRG6Q86SQ4 1221 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 TAGAPQ8N103 731 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 Q8NA96 180 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 SUPT20HQ8NEM7 779 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 OVCA2Q8WZ82 227 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 NPIPB3Q92617 1050 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 FEM1CQ96JP0 617 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 FAR2Q96K12 515 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 CLPBQ9H078 707 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 SYNPO2LQ9H987 977 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 BEX4Q9NWD9 120 aaPredicted RBP7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 HCFC1R1Q9NWW0 138 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 SLC12A4Q9UP95 1085 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 ZNF711Q9Y462 761 aa7.05□□□□□ -1.28
TM9SF3-206ENST00000490192 PASKQ96RG2 1323 aa7.04□□□□□ -1.28
TM9SF3-206ENST00000490192 PRAMEF33A0A0G2JMD5 474 aa7.04□□□□□ -1.28
TM9SF3-206ENST00000490192 FAM90A7PA6NKC0 464 aa7.04□□□□□ -1.28
TM9SF3-206ENST00000490192 ZAR1LA6NP61 321 aa7.04□□□□□ -1.28
TM9SF3-206ENST00000490192 FAM90A22PA8MWA6 464 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms