RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 STAT6P42226 847 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 ZNF84P51523 738 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 RHBDL3P58872 404 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 TNFAIP2Q03169 654 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 CSHL1Q14406 222 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 ETFDHQ16134 617 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 PFKFB4Q16877 469 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 TRIM71Q2Q1W2 868 aaKnown RBP5.98□□□□□ -1.45
CCDC39-206ENST00000489868 LIN54Q6MZP7 749 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 KRT27Q7Z3Y8 459 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 RFX6Q8HWS3 928 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 OR4N4Q8N0Y3 316 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 SAMD3Q8N6K7 520 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 ZNF527Q8NB42 609 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 VPS37AQ8NEZ2 397 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 FAM71BQ8TC56 605 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 WIPF2Q8TF74 440 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-206ENST00000489868 TRMT61AQ96FX7 289 aaKnown RBP5.98□□□□□ -1.45
CCDC39-206ENST00000489868 FCRL5Q96RD9 977 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 EIF3CQ99613 913 aaKnown RBP5.98□□□□□ -1.45
CCDC39-206ENST00000489868 FAM118BQ9BPY3 351 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 C1QTNF7Q9BXJ2 289 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 RNF26Q9BY78 433 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-206ENST00000489868 SPRTNQ9H040 489 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-206ENST00000489868 NRIP3Q9NQ35 241 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 RNF7Q9UBF6 113 aa5.98□□□□□ -1.45
CCDC39-206ENST00000489868 MAGED2Q9UNF1 606 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-206ENST00000489868 HEMK1Q9Y5R4 338 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-206ENST00000489868 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-206ENST00000489868 INO80B-WBP1J3KQ70 363 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 DSCR3O14972 297 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 RNF8O76064 485 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 VPS41P49754 854 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 ZNF81P51508 661 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 ALDH18A1P54886 795 aaKnown RBP5.97□□□□□ -1.45
CCDC39-206ENST00000489868 PFKFB3Q16875 520 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-206ENST00000489868 C1orf228Q6PIY5 440 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 POF1BQ8WVV4 589 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 P2RY11Q96G91 374 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 MECRQ9BV79 373 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 SLC29A3Q9BZD2 475 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 TP63Q9H3D4 680 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-206ENST00000489868 FBXO28Q9NVF7 368 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 ARL8BQ9NVJ2 186 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 LRCH1Q9Y2L9 728 aa5.97□□□□□ -1.45
CCDC39-206ENST00000489868 SIRT4Q9Y6E7 314 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-206ENST00000489868 PLAUP00749 431 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 GYS1P13807 737 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 TACR3P29371 465 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 HOXA7P31268 230 aaPredicted RBP5.96□□□□□ -1.46
CCDC39-206ENST00000489868 AKT1P31749 480 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 FAM3BP58499 235 aaPredicted RBP5.96□□□□□ -1.46
CCDC39-206ENST00000489868 DMWDQ09019 674 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 PTK2BQ14289 1009 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 BRD3Q15059 726 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 PUM3Q15397 648 aaKnown RBP5.96□□□□□ -1.46
CCDC39-206ENST00000489868 AAK1Q2M2I8 961 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 TUBB8Q3ZCM7 444 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 ZNF425Q6IV72 752 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 RINT1Q6NUQ1 792 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 LAS2Q8IYD9 372 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 ASB12Q8WXK4 309 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 CELF1Q92879 486 aaKnown RBP5.96□□□□□ -1.46
CCDC39-206ENST00000489868 TMEM184CQ9NVA4 438 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 B3GNT3Q9Y2A9 372 aa5.96□□□□□ -1.46
CCDC39-206ENST00000489868 UBE2J1Q9Y385 318 aaPredicted RBP5.96□□□□□ -1.46
CCDC39-206ENST00000489868 SLC22A23A1A5C7 686 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 FAM90A18PA6NE21 464 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 FAM90A16PA6NEW6 464 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 FAM90A9PA6NNJ1 464 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 FAM90A5PA8MXJ8 464 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 KIF28PB7ZC32 967 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 TRIM38O00635 465 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 INPPL1O15357 1258 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 FAM90A15PP0C7V4 464 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 FAM90A14PP0C7W9 464 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 ST6GAL1P15907 406 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 SLC8A1P32418 973 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 SOX2P48431 317 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 PNLIPRP1P54315 467 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 MORC3Q14149 939 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 BTBD16Q32M84 506 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 ZACNQ401N2 412 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 C11orf87Q6NUJ2 197 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 TRABD2AQ86V40 505 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 C16orf71Q8IYS4 520 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-206ENST00000489868 ATG16L2Q8NAA4 619 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 ZNF845Q96IR2 970 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-206ENST00000489868 GPR78Q96P69 363 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 SIGLEC11Q96RL6 698 aa5.95□□□□□ -1.46
CCDC39-206ENST00000489868 C2CD4BA6NLJ0 364 aa5.94□□□□□ -1.46
CCDC39-206ENST00000489868 F5H423 210 aaPredicted RBP5.94□□□□□ -1.46
CCDC39-206ENST00000489868 SYT5O00445 386 aa5.94□□□□□ -1.46
CCDC39-206ENST00000489868 RFPL3SP0C7P2 107 aa5.94□□□□□ -1.46
CCDC39-206ENST00000489868 CDK4P11802 303 aa5.94□□□□□ -1.46
CCDC39-206ENST00000489868 GHRHRQ02643 423 aa5.94□□□□□ -1.46
CCDC39-206ENST00000489868 PGBD2Q6P3X8 592 aa5.94□□□□□ -1.46
CCDC39-206ENST00000489868 RBM44Q6ZP01 1051 aaKnown RBP5.94□□□□□ -1.46
CCDC39-206ENST00000489868 TTC30AQ86WT1 665 aa5.94□□□□□ -1.46
CCDC39-206ENST00000489868 GATAD2AQ86YP4 633 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms