RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 SLCO2A1Q92959 643 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 SLC39A13Q96H72 371 aa22.43■■□□□ 1.18
SMC4-221ENST00000489573 EEF2KO00418 725 aaKnown RBP22.42■■□□□ 1.18
SMC4-221ENST00000489573 CREB3O43889 395 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 ECEL1O95672 775 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 TBX18O95935 607 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 SLC2A3P11169 496 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 CLCN4P51793 760 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 VSNL1P62760 191 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 OTUD4Q01804 1114 aaKnown RBP22.42■■□□□ 1.18
SMC4-221ENST00000489573 GUCY2DQ02846 1103 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 RAB30Q15771 203 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 HECTD3Q5T447 861 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 NKD2Q969F2 451 aaPredicted RBP22.42■■□□□ 1.18
SMC4-221ENST00000489573 FCRL2Q96LA5 508 aaPredicted RBP22.42■■□□□ 1.18
SMC4-221ENST00000489573 HAPLN3Q96S86 360 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 OSBPL2Q9H1P3 480 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 NKX2-4Q9H2Z4 354 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 PRDM16Q9HAZ2 1276 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 MSRAQ9UJ68 235 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 ZMYND10O75800 440 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 C1RP00736 705 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 PECAM1P16284 738 aaPredicted RBP22.42■■□□□ 1.18
SMC4-221ENST00000489573 TUBP50607 506 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 BYSLQ13895 437 aaKnown RBP22.42■■□□□ 1.18
SMC4-221ENST00000489573 MIB1Q86YT6 1006 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 PLD5Q8N7P1 536 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 ATL2Q8NHH9 583 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 SLC35B2Q8TB61 432 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 CCDC114Q96M63 670 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 EPAS1Q99814 870 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 TRIM51Q9BSJ1 452 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 RAB17Q9H0T7 212 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 ZNF334Q9HCZ1 680 aaPredicted RBP22.42■■□□□ 1.18
SMC4-221ENST00000489573 SAE1Q9UBE0 346 aaPredicted RBP22.42■■□□□ 1.18
SMC4-221ENST00000489573 FEZ2Q9UHY8 353 aaPredicted RBP22.42■■□□□ 1.18
SMC4-221ENST00000489573 DNPEPQ9ULA0 475 aa22.42■■□□□ 1.18
SMC4-221ENST00000489573 SLC12A8A0AV02 714 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 KCNU1A8MYU2 1149 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 FAM72CH0Y354 149 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 H0YGN5 161 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 APOEP02649 317 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 ATP5C1P36542 298 aaKnown RBP22.41■■□□□ 1.18
SMC4-221ENST00000489573 VCPP55072 806 aaKnown RBP22.41■■□□□ 1.18
SMC4-221ENST00000489573 TPI1P60174 286 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 FAM72AQ5TYM5 149 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 FAM72DQ6L9T8 149 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 KLHDC10Q6PID8 442 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 C1orf228Q6PIY5 440 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 RFX8Q6ZV50 586 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 FAM72BQ86X60 149 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 IFT20Q8IY31 132 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 P3H4Q92791 437 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 HINFPQ9BQA5 517 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 EPB41L5Q9HCM4 733 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 GDF3Q9NR23 364 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 ARHGEF4Q9NR80 690 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 ARGLU1Q9NWB6 273 aaPredicted RBP22.41■■□□□ 1.18
SMC4-221ENST00000489573 DNMT3LQ9UJW3 386 aa22.41■■□□□ 1.18
SMC4-221ENST00000489573 UTP11Q9Y3A2 253 aaKnown RBP22.41■■□□□ 1.18
SMC4-221ENST00000489573 ZSCAN5CA6NGD5 496 aaPredicted RBP22.4■■□□□ 1.18
SMC4-221ENST00000489573 PAGE1O75459 146 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 GAS8O95995 478 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 H2AFXP16104 143 aaPredicted RBP22.4■■□□□ 1.18
SMC4-221ENST00000489573 AMPD1P23109 780 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 HCAR3P49019 387 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 KPNA1P52294 538 aaPredicted RBP22.4■■□□□ 1.18
SMC4-221ENST00000489573 LMNB2Q03252 620 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 DPYSQ14117 519 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 BRD3Q15059 726 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 NOMO1Q15155 1222 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 NPNTQ6UXI9 565 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 SYDE1Q6ZW31 735 aaPredicted RBP22.4■■□□□ 1.18
SMC4-221ENST00000489573 RTL10Q7L3V2 364 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 ELMOD1Q8N336 334 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 NACA2Q9H009 215 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 OR12D3Q9UGF7 316 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 DRG1Q9Y295 367 aaKnown RBP22.4■■□□□ 1.18
SMC4-221ENST00000489573 HBS1LQ9Y450 684 aaKnown RBP22.4■■□□□ 1.18
SMC4-221ENST00000489573 SNX10Q9Y5X0 201 aa22.4■■□□□ 1.18
SMC4-221ENST00000489573 BHMG1C9JSJ3 638 aaPredicted RBP22.39■■□□□ 1.18
SMC4-221ENST00000489573 MCF2LO15068 1137 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 DAPK3O43293 454 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 CLASP2O75122 1294 aaKnown RBP22.39■■□□□ 1.18
SMC4-221ENST00000489573 MOCS2O96007 188 aaPredicted RBP22.39■■□□□ 1.18
SMC4-221ENST00000489573 IGLV3-27P01718 113 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 TNFRSF8P28908 595 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 RING1Q06587 406 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 OASLQ15646 514 aaKnown RBP22.39■■□□□ 1.18
SMC4-221ENST00000489573 PPM1LQ5SGD2 360 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 PPP2R2DQ66LE6 453 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 NCBP2-AS2Q69YL0 99 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 FBXO38Q6PIJ6 1188 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 CERS4Q9HA82 394 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 IL21Q9HBE4 155 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 ZNF148Q9UQR1 794 aa22.39■■□□□ 1.18
SMC4-221ENST00000489573 COCHO43405 550 aa22.38■■□□□ 1.17
SMC4-221ENST00000489573 F11P03951 625 aa22.38■■□□□ 1.17
SMC4-221ENST00000489573 ITGAVP06756 1048 aa22.38■■□□□ 1.17
SMC4-221ENST00000489573 EIF3EP60228 445 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms