RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 SKAP1Q86WV1 359 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 Q8N9P0 234 aaPredicted RBP4.25□□□□□ -1.73
RFC4-213ENST00000489028 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 PIGOQ8TEQ8 1089 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 NPIPB3Q92617 1050 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 CELF1Q92879 486 aaKnown RBP4.25□□□□□ -1.73
RFC4-213ENST00000489028 CUL5Q93034 780 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 GJA10Q969M2 543 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 TRMT61AQ96FX7 289 aaKnown RBP4.25□□□□□ -1.73
RFC4-213ENST00000489028 FCRL4Q96PJ5 515 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 ELOVL1Q9BW60 279 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 SCNM1Q9BWG6 230 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 TM7SF3Q9NS93 570 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 MAFFQ9ULX9 164 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 CEP83Q9Y592 693 aa4.25□□□□□ -1.73
RFC4-213ENST00000489028 LY6G6EA0A0G2JKS1 128 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 PNMA6EA0A0J9YXQ4 647 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 AQP12BA6NM10 295 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 HNRNPDLO14979 420 aaKnown RBP4.24□□□□□ -1.73
RFC4-213ENST00000489028 KAT7O95251 611 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 NTSR2O95665 410 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 FGBP02675 491 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 MMP8P22894 467 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 KLRK1P26718 216 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 PPM1AP35813 382 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 IL6STP40189 918 aaPredicted RBP4.24□□□□□ -1.73
RFC4-213ENST00000489028 HSF1Q00613 529 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 ID2Q02363 134 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 DMWDQ09019 674 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 FAM110CQ1W6H9 321 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 SLC9C1Q4G0N8 1177 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 EARS2Q5JPH6 523 aaKnown RBP4.24□□□□□ -1.73
RFC4-213ENST00000489028 PXDC1Q5TGL8 231 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 ANO7Q6IWH7 933 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 RBM44Q6ZP01 1051 aaKnown RBP4.24□□□□□ -1.73
RFC4-213ENST00000489028 LAS2Q8IYD9 372 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 FAM186BQ8IYM0 893 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 SLC22A17Q8WUG5 538 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 GLMPQ8WWB7 406 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 TNIP3Q96KP6 325 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 EIF3CQ99613 913 aaKnown RBP4.24□□□□□ -1.73
RFC4-213ENST00000489028 ELAC2Q9BQ52 826 aaKnown RBP4.24□□□□□ -1.73
RFC4-213ENST00000489028 PAAF1Q9BRP4 392 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 TMEM79Q9BSE2 394 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 TTLL2Q9BWV7 592 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 KCNK9Q9NPC2 374 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 CA14Q9ULX7 337 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 PCDHB7Q9Y5E2 793 aa4.24□□□□□ -1.73
RFC4-213ENST00000489028 CER1O95813 267 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 ANXA6P08133 673 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 PEPDP12955 493 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 NPPBP16860 134 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 RPS6KB1P23443 525 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 RPS13P62277 151 aaKnown RBP4.23□□□□□ -1.73
RFC4-213ENST00000489028 SRSF1Q07955 248 aaKnown RBP eCLIP4.23□□□□□ -1.73
RFC4-213ENST00000489028 MTA1Q13330 715 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 SYCP2LQ5T4T6 812 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 ARL6IP4Q66PJ3 421 aaKnown RBP4.23□□□□□ -1.73
RFC4-213ENST00000489028 KRT27Q7Z3Y8 459 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 UBE2Q1Q7Z7E8 422 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 CCDC146Q8IYE0 955 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 ASB12Q8WXK4 309 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 PIGKQ92643 395 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 MUL1Q969V5 352 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 ZNF845Q96IR2 970 aaPredicted RBP4.23□□□□□ -1.73
RFC4-213ENST00000489028 SENP7Q9BQF6 1050 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 NLRC4Q9NPP4 1024 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 HELLSQ9NRZ9 838 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 SLC52A1Q9NWF4 448 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 PI4KBQ9UBF8 816 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 HEY2Q9UBP5 337 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 B3GNT3Q9Y2A9 372 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.23□□□□□ -1.73
RFC4-213ENST00000489028 ZMYM2Q9UBW7 1377 aa4.23□□□□□ -1.73
RFC4-213ENST00000489028 LOC105369274A0A096LPK9 316 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 LOC102723532A0A0G2JNH3 316 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 ASNA1O43681 348 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 RPP40O75818 363 aaKnown RBP4.22□□□□□ -1.73
RFC4-213ENST00000489028 GLP2RO95838 553 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 HMGB1P09429 215 aaKnown RBP4.22□□□□□ -1.73
RFC4-213ENST00000489028 RFPL3SP0C7P2 107 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 SLC8A1P32418 973 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 CPA2P48052 419 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 FAM3BP58499 235 aaPredicted RBP4.22□□□□□ -1.73
RFC4-213ENST00000489028 STIM1Q13586 685 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 CSHL1Q14406 222 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 IRF2BP2Q7Z5L9 587 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 RHPN2Q8IUC4 686 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.22□□□□□ -1.73
RFC4-213ENST00000489028 OR4N4Q8N0Y3 316 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 ZNF366Q8N895 744 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 ZNF548Q8NEK5 533 aaPredicted RBP4.22□□□□□ -1.73
RFC4-213ENST00000489028 OR1N1Q8NGS0 311 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 STYXQ8WUJ0 223 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 ZBTB9Q96C00 473 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 SLC39A13Q96H72 371 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 TMEM41AQ96HV5 264 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 GPR78Q96P69 363 aa4.22□□□□□ -1.73
RFC4-213ENST00000489028 MOV10Q9HCE1 1003 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms