RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CCL26Q9Y258 94 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 GOLGA6BA6NDN3 693 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 MIF4GDA9UHW6 222 aaKnown RBP20.14■□□□□ 0.81
CCM2-216ENST00000488727 ATMINO43313 823 aaPredicted RBP20.14■□□□□ 0.81
CCM2-216ENST00000488727 RNF40O75150 1001 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 GJB6O95452 261 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 PFKLP17858 780 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 RRM1P23921 792 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 SCNN1AP37088 669 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 CARSP49589 748 aaKnown RBP20.14■□□□□ 0.81
CCM2-216ENST00000488727 C10orf120Q5SQS8 335 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 SYPL2Q5VXT5 272 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 PARM1Q6UWI2 310 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 FGF14Q92915 247 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 USP13Q92995 863 aaPredicted RBP20.14■□□□□ 0.81
CCM2-216ENST00000488727 RSPRY1Q96DX4 576 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 VCPIP1Q96JH7 1222 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 ZFRQ96KR1 1074 aaKnown RBP20.14■□□□□ 0.81
CCM2-216ENST00000488727 POPDC2Q9HBU9 364 aa20.14■□□□□ 0.81
CCM2-216ENST00000488727 KRIT1O00522 736 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 HSF2BPO75031 334 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 NCAM1P13591 858 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 WEE1P30291 646 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 VIPR2P41587 438 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 SLC7A9P82251 487 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 PPP2R5EQ16537 467 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 KLHDC10Q6PID8 442 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 KLHL7Q8IXQ5 586 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 ZDHHC14Q8IZN3 488 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 C3orf20Q8ND61 904 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 SLC2A13Q96QE2 648 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 NAP1L3Q99457 506 aaPredicted RBP20.13■□□□□ 0.81
CCM2-216ENST00000488727 SH3GL2Q99962 352 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 TRPV4Q9HBA0 871 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 METTL5Q9NRN9 209 aaKnown RBP20.13■□□□□ 0.81
CCM2-216ENST00000488727 CTTNBP2NLQ9P2B4 639 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 WDR35Q9P2L0 1181 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 CYP1A2P05177 515 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 MBL2P11226 248 aaPredicted RBP20.13■□□□□ 0.81
CCM2-216ENST00000488727 ATP5C1P36542 298 aaKnown RBP20.13■□□□□ 0.81
CCM2-216ENST00000488727 GGCXP38435 758 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 CUL1Q13616 776 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 DCAF12L1Q5VU92 463 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 TANGO2Q6ICL3 276 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 TRNP1Q6NT89 227 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 BEND5Q7L4P6 421 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 DEFB106AQ8N104 65 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 RIN3Q8TB24 985 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 HINFPQ9BQA5 517 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 NACA2Q9H009 215 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 TDP1Q9NUW8 608 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 SMPD4Q9NXE4 827 aa20.13■□□□□ 0.81
CCM2-216ENST00000488727 MYO10Q9HD67 2058 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 ZSCAN5CA6NGD5 496 aaPredicted RBP20.12■□□□□ 0.81
CCM2-216ENST00000488727 ANHXE9PGG2 379 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 DAB1O75553 588 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 FLT3P36888 993 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 GYS2P54840 703 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 PITX1P78337 314 aaPredicted RBP20.12■□□□□ 0.81
CCM2-216ENST00000488727 EFEMP1Q12805 493 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 HTR4Q13639 388 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 MSANTD2Q6P1R3 559 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 PLCD3Q8N3E9 789 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 TSEN2Q8NCE0 465 aaKnown RBP20.12■□□□□ 0.81
CCM2-216ENST00000488727 JOSD2Q8TAC2 188 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 RNF139Q8WU17 664 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 ZNF653Q96CK0 615 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 LRRC3BQ96PB8 259 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 CDK5RAP1Q96SZ6 601 aaKnown RBP20.12■□□□□ 0.81
CCM2-216ENST00000488727 RPP25Q9BUL9 199 aaKnown RBP20.12■□□□□ 0.81
CCM2-216ENST00000488727 LIMD1Q9UGP4 676 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 SFMBT1Q9UHJ3 866 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 RASAL2Q9UJF2 1139 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 DNMT3LQ9UJW3 386 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 NFU1Q9UMS0 254 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 ARHGAP26Q9UNA1 814 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 CPQQ9Y646 472 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 ALG6Q9Y672 507 aa20.12■□□□□ 0.81
CCM2-216ENST00000488727 C19orf67A6NJJ6 358 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 DCAF6Q58WW2 860 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 PPP1R15BQ5SWA1 713 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 PLEKHA7Q6IQ23 1121 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 TADA2BQ86TJ2 420 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 MIB1Q86YT6 1006 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 EMC1Q8N766 993 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 ADAMTS19Q8TE59 1207 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 DQX1Q8TE96 717 aaKnown RBP20.11■□□□□ 0.81
CCM2-216ENST00000488727 RSAD2Q8WXG1 361 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 KXD1Q9BQD3 176 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 TRIM62Q9BVG3 475 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 AP1M1Q9BXS5 423 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 ZFP14Q9HCL3 533 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 GKN1Q9NS71 199 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 OLA1Q9NTK5 396 aaKnown RBP20.11■□□□□ 0.81
CCM2-216ENST00000488727 MARCH2Q9P0N8 246 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 UVRAGQ9P2Y5 699 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 NUMBLQ9Y6R0 609 aa20.11■□□□□ 0.81
CCM2-216ENST00000488727 KIF26AQ9ULI4 1882 aaPredicted RBP20.11■□□□□ 0.81
CCM2-216ENST00000488727 CAPN9O14815 690 aa20.1■□□□□ 0.81
CCM2-216ENST00000488727 OPA1O60313 960 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms