RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 USP30Q70CQ3 517 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 PTRH1Q86Y79 214 aaKnown RBP12.31□□□□□ -0.44
TRIM56-204ENST00000487252 NUP93Q8N1F7 819 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 C1orf127Q8N9H9 656 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 OR4C6Q8NH72 309 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 ATXN7L3BQ96GX2 97 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 INTS4Q96HW7 963 aaKnown RBP12.31□□□□□ -0.44
TRIM56-204ENST00000487252 TMX3Q96JJ7 454 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 FBRSQ9HAH7 460 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 CHORDC1Q9UHD1 332 aaPredicted RBP12.31□□□□□ -0.44
TRIM56-204ENST00000487252 ANAPC2Q9UJX6 822 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 ACSL6Q9UKU0 697 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 DNM3Q9UQ16 869 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 ENTPD2Q9Y5L3 495 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 PDZD2O15018 2839 aa12.31□□□□□ -0.44
TRIM56-204ENST00000487252 LY6G6EA0A0G2JKS1 128 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 CDKL5O76039 1030 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 ITGB3P05106 788 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 GIMD1P0DJR0 217 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 SCP2P22307 547 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 GALCP54803 685 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 CYP27A1Q02318 531 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 SRSF6Q13247 344 aaKnown RBP12.3□□□□□ -0.44
TRIM56-204ENST00000487252 MORC3Q14149 939 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 SKOR2Q2VWA4 1001 aaPredicted RBP12.3□□□□□ -0.44
TRIM56-204ENST00000487252 FYB2Q5VWT5 728 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 KCNK18Q7Z418 384 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 ARL14Q8N4G2 192 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 SORCS1Q8WY21 1168 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 MIB2Q96AX9 1013 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 GZF1Q9H116 711 aaPredicted RBP12.3□□□□□ -0.44
TRIM56-204ENST00000487252 BRMS1Q9HCU9 246 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 AASDHPPTQ9NRN7 309 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 AGAP1Q9UPQ3 857 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 STYXL1Q9Y6J8 313 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 U3KQA8 63 aa12.3□□□□□ -0.44
TRIM56-204ENST00000487252 ZFC3H1O60293 1989 aaKnown RBP12.29□□□□□ -0.44
TRIM56-204ENST00000487252 TIMM44O43615 452 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 RTN3O95197 1032 aaPredicted RBP12.29□□□□□ -0.44
TRIM56-204ENST00000487252 ITGA2BP08514 1039 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 PGFP49763 221 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 CCR5P51681 352 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 DAB2P98082 770 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
TRIM56-204ENST00000487252 TTC31Q49AM3 519 aaPredicted RBP12.29□□□□□ -0.44
TRIM56-204ENST00000487252 ANKS1BQ7Z6G8 1248 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 MFSD2AQ8NA29 543 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 BHMTQ93088 406 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 FBXO32Q969P5 355 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 TM6SF1Q9BZW5 370 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 KDM4CQ9H3R0 1056 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 PRSS16Q9NQE7 514 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
TRIM56-204ENST00000487252 ORC3Q9UBD5 711 aaPredicted RBP12.29□□□□□ -0.44
TRIM56-204ENST00000487252 PLAAQ9Y263 795 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
TRIM56-204ENST00000487252 IL18RAPO95256 599 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 DNTTP04053 509 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 FDPSP14324 419 aaKnown RBP12.28□□□□□ -0.44
TRIM56-204ENST00000487252 HARS2P49590 506 aaKnown RBP12.28□□□□□ -0.44
TRIM56-204ENST00000487252 WNT7BP56706 349 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 RAD51AP2Q09MP3 1159 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 IFRD2Q12894 506 aaPredicted RBP12.28□□□□□ -0.44
TRIM56-204ENST00000487252 STK3Q13188 491 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 NCEH1Q6PIU2 408 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 IQCHQ86VS3 1027 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 C4orf32Q8N8J7 132 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 IGSF22Q8N9C0 903 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRIM56-204ENST00000487252 SCAMP5Q8TAC9 235 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 HTR3CQ8WXA8 447 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 TMPRSS4Q9NRS4 437 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 LARSQ9P2J5 1176 aaKnown RBP12.28□□□□□ -0.44
TRIM56-204ENST00000487252 SIX4Q9UIU6 781 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 SCML1Q9UN30 329 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 ZDHHC9Q9Y397 364 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 NME7Q9Y5B8 376 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 PCDHGA7Q9Y5G6 932 aa12.28□□□□□ -0.44
TRIM56-204ENST00000487252 ANKRD63C9JTQ0 380 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 LATO43561 262 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 TLR5O60602 858 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 DTNBO60941 627 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 SDC3O75056 442 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 TNFSF15O95150 251 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 CTDNEP1O95476 244 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 TBX18O95935 607 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 THEGLP0DJG4 465 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 PLCG1P19174 1290 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 TGM2P21980 687 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 WARSP23381 471 aaKnown RBP12.27□□□□□ -0.45
TRIM56-204ENST00000487252 DGKAP23743 735 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 PSMA5P28066 241 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 PDE4CQ08493 712 aa12.27□□□□□ -0.45
TRIM56-204ENST00000487252 TGIF1Q15583 401 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms