RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 ITM2BQ9Y287 266 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 RIPK3Q9Y572 518 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 RBP1P09455 135 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 TNFSF9P41273 254 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 RPL21P46778 160 aaKnown RBP13.71□□□□□ -0.21
HDLBP-241ENST00000487169 SKOR1P84550 965 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 KCNMA1Q12791 1236 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 IKBKEQ14164 716 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 WNT8BQ93098 351 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 TMBIM4Q9HC24 238 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 V9GYQ6 96 aa13.71□□□□□ -0.21
HDLBP-241ENST00000487169 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.21
HDLBP-241ENST00000487169 MYO1GB0I1T2 1018 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 APOC4-APOC2K7ER74 178 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 B4GALT5O43286 388 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 VAPBO95292 243 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 MT-CO1P00395 513 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 APOC2P02655 101 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 CDH2P19022 906 aaPredicted RBP13.71□□□□□ -0.22
HDLBP-241ENST00000487169 NUDT2P50583 147 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 CCL23P55773 120 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 AASDHQ4L235 1098 aaPredicted RBP13.71□□□□□ -0.22
HDLBP-241ENST00000487169 LGI2Q8N0V4 545 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 ZNF333Q96JL9 665 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 HSFY1Q96LI6 401 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 ADNPQ9H2P0 1102 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 SCHIP1Q9P0W5 487 aaPredicted RBP13.71□□□□□ -0.22
HDLBP-241ENST00000487169 ARHGAP26Q9UNA1 814 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 PCDHGC5Q9Y5F6 944 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 RTN3O95197 1032 aaPredicted RBP13.71□□□□□ -0.22
HDLBP-241ENST00000487169 TRUB2O95900 331 aaKnown RBP13.71□□□□□ -0.22
HDLBP-241ENST00000487169 RBL1P28749 1068 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 GP5P40197 560 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 TREML2Q5T2D2 321 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 AP1ARQ63HQ0 302 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 ACO2Q99798 780 aaKnown RBP13.71□□□□□ -0.22
HDLBP-241ENST00000487169 UNKQ9C0B0 810 aaKnown RBP13.71□□□□□ -0.22
HDLBP-241ENST00000487169 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.22
HDLBP-241ENST00000487169 TOPAZ1Q8N9V7 1692 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 MAGEB16A2A368 324 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 SOAT1P35610 550 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 NR2C2P49116 596 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 UGCGQ16739 394 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 LBX2Q6XYB7 198 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 ABTB1Q969K4 478 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-241ENST00000487169 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 OSGEPL1Q9H4B0 414 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 IGF2BP3O00425 579 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■■■□ 19.5
HDLBP-241ENST00000487169 SYNCRIPO60506 623 aaKnown RBP13.7□□□□□ -0.22
HDLBP-241ENST00000487169 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
HDLBP-241ENST00000487169 CNTFP26441 200 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 CD151P48509 253 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 FLT3LGP49771 235 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 DMC1Q14565 340 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 CES3Q6UWW8 571 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 CREG2Q8IUH2 290 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 FAM71AQ8IYT1 594 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 SAE1Q9UBE0 346 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-241ENST00000487169 TRHDEQ9UKU6 1024 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 DNAJC16Q9Y2G8 782 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 RP1L1Q8IWN7 2480 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-241ENST00000487169 TGFB1I1O43294 461 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 DDHD2O94830 711 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 CKBP12277 381 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 GRK2P25098 689 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 TARSP26639 723 aaKnown RBP13.7□□□□□ -0.22
HDLBP-241ENST00000487169 SEL1L3Q68CR1 1132 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 RBBP8Q99708 897 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 ACTR8Q9H981 624 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 IPPQ9Y573 584 aa13.7□□□□□ -0.22
HDLBP-241ENST00000487169 SIGLEC16A6NMB1 481 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 ALOX15P16050 662 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-241ENST00000487169 NPR3P17342 541 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 MGAT1P26572 445 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 RAP1GDS1P52306 607 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 FKBP1BP68106 108 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 MIIPQ5JXC2 388 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 INPP5DQ92835 1189 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 YIPF3Q9GZM5 350 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 OR12D3Q9UGF7 316 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 ST3GAL5Q9UNP4 418 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 YDJCA8MPS7 323 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 PBLDP30039 288 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-241ENST00000487169 AQP5P55064 265 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 DAB2P98082 770 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 AMPD2Q01433 879 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 CAMK2GQ13555 558 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-241ENST00000487169 C10orf88Q9H8K7 445 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 GIMAP4Q9NUV9 329 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 NMRK1Q9NWW6 199 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 ALDH1A2O94788 518 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 AMHP03971 560 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 SNHG28P0DPA3 235 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-241ENST00000487169 KDELR1P24390 212 aa13.69□□□□□ -0.22
HDLBP-241ENST00000487169 MRPS6P82932 125 aaKnown RBP13.69□□□□□ -0.22
HDLBP-241ENST00000487169 FLOT2Q14254 428 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms