RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 KCNC3Q14003 757 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 ANKRD20A8PQ5CZ79 823 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 PPP6R3Q5H9R7 873 aaPredicted RBP13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 AADACL2Q6P093 401 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 BBS12Q6ZW61 710 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 GAREM2Q75VX8 874 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 BZW1Q7L1Q6 419 aaKnown RBP13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 RFX6Q8HWS3 928 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 HS6ST3Q8IZP7 471 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 MMGT1Q8N4V1 131 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 EFHBQ8N7U6 833 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 ACSF2Q96CM8 615 aaPredicted RBP13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 FAF2Q96CS3 445 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 FCRL2Q96LA5 508 aaPredicted RBP13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 HEMGNQ9BXL5 484 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 DCLK3Q9C098 648 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 SFXN1Q9H9B4 322 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 KLHL11Q9NVR0 708 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 GPATCH2LQ9NWQ4 482 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 MTMR10Q9NXD2 777 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 DONSONQ9NYP3 566 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 DNMT3BQ9UBC3 853 aaKnown RBP13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 OR12D3Q9UGF7 316 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 MYO16Q9Y6X6 1858 aa13.74□□□□□ -0.21
VTI1BP1-201ENST00000486325 TRAV19A0A0A6YYK7 116 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 EEF2KO00418 725 aaKnown RBP13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 DAPK3O43293 454 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 MSI1O43347 362 aaKnown RBP13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 PAGE1O75459 146 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 TADA3O75528 432 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 RHOP08100 348 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 HOXB8P17481 243 aaPredicted RBP13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 IL4RP24394 825 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 SLC11A2P49281 568 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 TERF1P54274 439 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 KLF1Q13351 362 aaPredicted RBP13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 CCNG2Q16589 344 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 CA9Q16790 459 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 GLE1Q53GS7 698 aaKnown RBP13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 KAZNQ674X7 775 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 LRRC31Q6UY01 552 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 CCDC26Q8TAB7 109 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 TSC1Q92574 1164 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 UBXN4Q92575 508 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 KCTD15Q96SI1 283 aaPredicted RBP13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 DDX50Q9BQ39 737 aaKnown RBP13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 KLF16Q9BXK1 252 aaPredicted RBP13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 AP1M1Q9BXS5 423 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 TRPC7Q9HCX4 862 aa13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 CWC15Q9P013 229 aaKnown RBP13.73□□□□□ -0.21
VTI1BP1-201ENST00000486325 C2orf78A6NCI8 922 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 APOC4-APOC2K7ER74 178 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 APOL1O14791 398 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 CREB3O43889 395 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 CST8O60676 142 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 LATS1O95835 1130 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 OLFM2O95897 454 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 APOC2P02655 101 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 CD48P09326 243 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 MBL2P11226 248 aaPredicted RBP13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 KRT10P13645 584 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 POU3F3P20264 500 aaPredicted RBP13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 TGM2P21980 687 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 CHRNA3P32297 505 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 NR2C2P49116 596 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 TPI1P60174 286 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 SLC7A9P82251 487 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 LMNB2Q03252 620 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 SEMA3BQ13214 749 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 CYP1B1Q16678 543 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 TXNDC8Q6A555 127 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 MAATS1Q7Z4T9 603 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 DDX42Q86XP3 938 aaKnown RBP eCLIP13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 MYRIPQ8NFW9 859 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 SMG7Q92540 1137 aaKnown RBP13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 MAGOHBQ96A72 148 aaKnown RBP13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 CSPG4P5Q96PW8 444 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 RNF38Q9H0F5 515 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 SIK2Q9H0K1 926 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 IGFLR1Q9H665 355 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 RETREG1Q9H6L5 497 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 TASP1Q9H6P5 420 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 LRRC19Q9H756 370 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 SMARCAL1Q9NZC9 954 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 ZNF510Q9Y2H8 683 aa13.72□□□□□ -0.21
VTI1BP1-201ENST00000486325 A0A1W2PRU2 124 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 PHF2O75151 1096 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 HMBSP08397 361 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 FNTAP49354 379 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 MMRN1Q13201 1228 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 TCEAL5Q5H9L2 206 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 ZNF697Q5TEC3 545 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 SLC9A4Q6AI14 798 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 DRICH1Q6PGQ1 229 aaPredicted RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 RFX8Q6ZV50 586 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 GRASPQ7Z6J2 395 aaPredicted RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 PYROXD2Q8N2H3 581 aa13.71□□□□□ -0.21
VTI1BP1-201ENST00000486325 ARL14EPQ8N8R7 260 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms