RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ARHGEF4Q9NR80 690 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TBCCD1Q9NVR7 557 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PPP1R14DQ9NXH3 145 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 IFNKQ9P0W0 207 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 DNAI1Q9UI46 699 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PTBP2Q9UKA9 531 aaKnown RBP4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 TSC22D4Q9Y3Q8 395 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PCDHB4Q9Y5E5 795 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 PCDHGB5Q9Y5G0 923 aa4.25□□□□□ -1.73
PRPF38B-205ENST00000485810 MROH7-TTC4A0A0A0MT08 1334 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 FLT1P17948 1338 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 UBN2Q6ZU65 1347 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 TRBV23-1A0A0A0MS06 115 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 EFCAB8A8MWE9 144 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 EBAG9O00559 213 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 KDM1AO60341 852 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 DOK2O60496 412 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 B4GALT3O60512 393 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 DIAPH2O60879 1101 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF254O75437 659 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ERLIN1O75477 346 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 DNAJC8O75937 253 aaPredicted RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 URI1O94763 535 aaPredicted RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 BMP15O95972 392 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 LRG1P02750 347 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 MMP1P03956 469 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 HEXBP07686 556 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 POU2F2P09086 479 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 CLTBP09497 229 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 CKBP12277 381 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ALAS1P13196 640 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 PDE6AP16499 860 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 TMEM11P17152 192 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 BPIP17213 487 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 AKAP5P24588 427 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 MC4RP32245 332 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 HSD17B2P37059 387 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 MTIF2P46199 727 aaKnown RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ID4P47928 161 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 PIP4K2AP48426 406 aaPredicted RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 GTF2A1P52655 376 aaPredicted RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 BLVRAP53004 296 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 MAPK10P53779 464 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 CTAG1AP78358 180 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 NKX3-2P78367 333 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 CBX1P83916 185 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 GALNT1Q10472 559 aaPredicted RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 GRSF1Q12849 480 aaKnown RBP eCLIP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 MAP4K2Q12851 820 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 KLF1Q13351 362 aaPredicted RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ADAM9Q13443 819 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 CUL4BQ13620 913 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 TUBB2AQ13885 445 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 COG2Q14746 738 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 FAM209AQ5JX71 171 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 SH2D4BQ5SQS7 431 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 OTUD7BQ6GQQ9 843 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 FBXO38Q6PIJ6 1188 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 KCNV1Q6PIU1 500 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 B3GNT9Q6UX72 402 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 TMC5Q6UXY8 1006 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 KIF6Q6ZMV9 814 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 RGS9BPQ6ZS82 235 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 IKBIPQ70UQ0 350 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 UBE2R2Q712K3 238 aaPredicted RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 CYB5R4Q7L1T6 521 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 PTRH1Q86Y79 214 aaKnown RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 FOXP4Q8IVH2 680 aaPredicted RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 REXO1L1PQ8IX06 675 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 LGI4Q8N135 537 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 PRR18Q8N4B5 295 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ANKRD53Q8N9V6 530 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF527Q8NB42 609 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 CHST13Q8NET6 341 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 IL17RDQ8NFM7 739 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 TRIM58Q8NG06 486 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 RFWD2Q8NHY2 731 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 GDAP1Q8TB36 358 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 GOLGA5Q8TBA6 731 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ZFAND2BQ8WV99 257 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 FATE1Q969F0 183 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 MBD6Q96DN6 1003 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 TOE1Q96GM8 510 aaKnown RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 EXOC2Q96KP1 924 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 FNBP1Q96RU3 617 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 AARSD1Q9BTE6 412 aaKnown RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF747Q9BV97 191 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 TUBB2BQ9BVA1 445 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 TMEM120AQ9BXJ8 343 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 RNF26Q9BY78 433 aaPredicted RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 KRT23Q9C075 422 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 OR10A4Q9H209 315 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 RABEP2Q9H5N1 569 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 LIN28AQ9H9Z2 209 aaKnown RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 SPON1Q9HCB6 807 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 KRT84Q9NSB2 600 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 DDX18Q9NVP1 670 aaKnown RBP4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 ADPRHL2Q9NX46 363 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 GGA3Q9NZ52 723 aa4.24□□□□□ -1.73
PRPF38B-205ENST00000485810 SPATA7Q9P0W8 599 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms