RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CIPCQ9C0C6 399 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 CAPN10Q9HC96 672 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 FSCN3Q9NQT6 498 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 MAN1B1Q9UKM7 699 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 TIMM44O43615 452 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 TSPAN3O60637 253 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 CD44P16070 742 aaKnown RBP17.9■□□□□ 0.46
SMC4-216ENST00000485645 CD6P30203 668 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 DAOAP59103 153 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 ZNF445P59923 1031 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 ARID5AQ03989 594 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 FOXC1Q12948 553 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 ZNF234Q14588 700 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 STILQ15468 1287 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 SYCP2LQ5T4T6 812 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 KLHL10Q6JEL2 608 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 PPM1KQ8N3J5 372 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 HDDC3Q8N4P3 179 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 TFAP2BQ92481 460 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 MKRN2Q9H000 416 aaKnown RBP17.9■□□□□ 0.46
SMC4-216ENST00000485645 ITM2CQ9NQX7 267 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 ADAMTS9Q9P2N4 1935 aa17.9■□□□□ 0.46
SMC4-216ENST00000485645 PCNX2A6NKB5 2137 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 P4HA2O15460 535 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 LATS1O95835 1130 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 SYPP08247 313 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 HOXD9P28356 352 aaPredicted RBP17.89■□□□□ 0.45
SMC4-216ENST00000485645 RGS7P49802 495 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 CNGA2Q16280 664 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 WDR45BQ5MNZ6 344 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 PMF1Q6P1K2 205 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 TMPRSS6Q8IU80 811 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 SLC35F5Q8WV83 523 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 TMA16Q96EY4 203 aaKnown RBP17.89■□□□□ 0.45
SMC4-216ENST00000485645 SIPA1Q96FS4 1042 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 TOE1Q96GM8 510 aaKnown RBP17.89■□□□□ 0.45
SMC4-216ENST00000485645 WSB2Q9NYS7 404 aaPredicted RBP17.89■□□□□ 0.45
SMC4-216ENST00000485645 USP36Q9P275 1121 aaKnown RBP17.89■□□□□ 0.45
SMC4-216ENST00000485645 SUSD2Q9UGT4 822 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 STOML2Q9UJZ1 356 aa17.89■□□□□ 0.45
SMC4-216ENST00000485645 BICDL2A1A5D9 508 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 UPK3BL1B0FP48 263 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 UPK3BL2E5RIL1 263 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 M0QYV0 167 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 RNF225M0QZC1 329 aaPredicted RBP17.88■□□□□ 0.45
SMC4-216ENST00000485645 ARHGAP33O14559 1287 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 MSI1O43347 362 aaKnown RBP17.88■□□□□ 0.45
SMC4-216ENST00000485645 OPHN1O60890 802 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 EPHX1P07099 455 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 GNSP15586 552 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 SEMA3BQ13214 749 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 ADGRF1Q5T601 910 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 TMEM215Q68D42 235 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 TTI2Q6NXR4 508 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 SERPINA13PQ6UXR4 307 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 MINDY1Q8N5J2 469 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 RBBP8NLQ8NC74 664 aaPredicted RBP17.88■□□□□ 0.45
SMC4-216ENST00000485645 NELFBQ8WX92 580 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 SORCS1Q8WY21 1168 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 IRGQQ8WZA9 623 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 PRCCQ92733 491 aaPredicted RBP17.88■□□□□ 0.45
SMC4-216ENST00000485645 KAT5Q92993 513 aa17.88■□□□□ 0.45
SMC4-216ENST00000485645 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.88■□□□□ 0.45
SMC4-216ENST00000485645 CEP295Q9C0D2 2601 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 PPP1R3GB7ZBB8 358 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 PIK3R2O00459 728 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 ACADMP11310 421 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 NCAM1P13591 858 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 PRKCHP24723 683 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 BRD2P25440 801 aaKnown RBP17.87■□□□□ 0.45
SMC4-216ENST00000485645 HLA-FP30511 346 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 OXTRP30559 389 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 PLEKHG6Q3KR16 790 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 MSANTD2Q6P1R3 559 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 FOXR2Q6PJQ5 311 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 RRAGAQ7L523 313 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 PIP4P1Q86T03 277 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 UNC45BQ8IWX7 931 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 LMO3Q8TAP4 145 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 WFIKKN2Q8TEU8 576 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 GOLGA1Q92805 767 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 HSFY1Q96LI6 401 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 ZSWIM1Q9BR11 485 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 GPR174Q9BXC1 333 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 PLA2G4CQ9UP65 541 aa17.87■□□□□ 0.45
SMC4-216ENST00000485645 PCDH15Q96QU1 1955 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 MEI4A8MW99 385 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 KCNJ18B7U540 433 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 GABBR2O75899 941 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 FBXO21O94952 628 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 GNA14O95837 355 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 LTFP02788 710 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 BMP6P22004 513 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 MAOBP27338 520 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 TPMTP51580 245 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 COPAP53621 1224 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 GCNT1Q02742 428 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 KCNH2Q12809 1159 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 CHST9Q7L1S5 443 aa17.86■□□□□ 0.45
SMC4-216ENST00000485645 EHBP1Q8NDI1 1231 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms